Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-279 |
| Cow position: | chr8:8905817-8905537 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 218 |
| Conread position: | 1-286 |
| Cow position: | chr8:38608680-38608405 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 1-299 |
| Cow position: | chr8:25541234-25541532 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 1-314 |
| Cow position: | chr8:44692427-44692748 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 295 |
| Conread position: | 2-489 |
| Cow position: | chr8:11800507-11800988 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 2-495 |
| Cow position: | chr8:46945895-46945401 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 3-212 |
| Cow position: | chr8:9541165-9540956 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 3-492 |
| Cow position: | chr8:47073504-47073995 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 313 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 3-495 |
| Cow position: | chr8:44121128-44121614 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 3-495 |
| Cow position: | chr8:46093577-46093089 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 3-512 |
| Cow position: | chr8:11756968-11757489 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-521 |
| Cow position: | chr8:11971295-11970784 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 9-322 |
| Cow position: | chr8:45162245-45161935 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 17-495 |
| Cow position: | chr8:27577654-27578137 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 17-516 |
| Cow position: | chr8:8519323-8518821 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 62-495 |
| Cow position: | chr8:10747676-10748112 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 267, 207 |
| Conread position: | 62-495 |
| Cow position: | chr8:22573028-22572592 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 214, 50 |
| Conread position: | 62-495 |
| Cow position: | chr8:26007474-26007035 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 153, 203 |
| Conread position: | 62-495 |
| Cow position: | chr8:32440151-32439714 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr8:32635375-32634938 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 252, 201 |
| Conread position: | 62-495 |
| Cow position: | chr8:47070516-47070081 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 246, 10 |
| Conread position: | 72-495 |
| Cow position: | chr8:1154970-1154543 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr8:8557827-8557402 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 292, 191 |
| Conread position: | 72-495 |
| Cow position: | chr8:8593404-8592976 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 222, 191 |
| Conread position: | 72-495 |
| Cow position: | chr8:9274320-9274748 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 191, 200 |
| Conread position: | 72-495 |
| Cow position: | chr8:37930223-37930650 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 99-495 |
| Cow position: | chr8:8656890-8656488 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 158, 165 |
| Conread position: | 102-471 |
| Cow position: | chr8:1581114-1581483 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 228, 161 |
| Conread position: | 116-277 |
| Cow position: | chr8:26623015-26623173 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 134-489 |
| Cow position: | chr8:30491307-30490952 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 138-521 |
| Cow position: | chr8:24421386-24421002 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 220 |
| Conread position: | 145-489 |
| Cow position: | chr8:10744193-10743856 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 161-488 |
| Cow position: | chr8:11760786-11761117 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 192-473 |
| Cow position: | chr8:61036432-61036153 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 175, 127 |
| Conread position: | 195-520 |
| Cow position: | chr8:27924595-27924917 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 207-489 |
| Cow position: | chr8:23216259-23216537 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 167, 40 |
| Conread position: | 207-489 |
| Cow position: | chr8:47669952-47670233 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 207-521 |
| Cow position: | chr8:19229278-19229587 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 209-489 |
| Cow position: | chr8:44037264-44036986 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 209-489 |
| Cow position: | chr8:45317622-45317345 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 213-489 |
| Cow position: | chr8:51860491-51860216 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 217-517 |
| Cow position: | chr8:47884489-47884792 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 223-520 |
| Cow position: | chr8:33429408-33429701 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 227 |
| Conread position: | 224-521 |
| Cow position: | chr8:42162161-42161867 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 256-489 |
| Cow position: | chr8:3784090-3784335 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 256-521 |
| Cow position: | chr8:9540978-9540715 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 258-520 |
| Cow position: | chr8:45188605-45188871 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 269-489 |
| Cow position: | chr8:25777345-25777120 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 307-489 |
| Cow position: | chr8:44245007-44244817 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 329-511 |
| Cow position: | chr8:53426918-53427104 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 329-515 |
| Cow position: | chr8:38607934-38607749 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 40, 169 |
| Conread position: | 329-520 |
| Cow position: | chr8:27984222-27984028 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 340-519 |
| Cow position: | chr8:44077417-44077240 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 341-505 |
| Cow position: | chr8:23766743-23766578 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.