Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 3-300 |
| Cow position: | chr9:11321410-11321699 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 4-400 |
| Cow position: | chr9:18002171-18002561 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 271 |
| Conread position: | 9-519 |
| Cow position: | chr9:3802438-3802947 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 12-495 |
| Cow position: | chr9:2068181-2067690 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 62-494 |
| Cow position: | chr9:4671552-4671987 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 201 |
| Conread position: | 62-495 |
| Cow position: | chr9:28676631-28677068 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 72-495 |
| Cow position: | chr9:781847-781420 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr9:16267312-16267740 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 236, 191 |
| Conread position: | 72-495 |
| Cow position: | chr9:27933046-27933473 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr9:45872299-45872731 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 181, 71 |
| Conread position: | 72-495 |
| Cow position: | chr9:51201153-51201581 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 236, 191 |
| Conread position: | 72-495 |
| Cow position: | chr9:51210318-51210746 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 222, 191 |
| Conread position: | 72-496 |
| Cow position: | chr9:36723173-36723597 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 171, 178 |
| Conread position: | 72-516 |
| Cow position: | chr9:2489008-2488559 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 99-495 |
| Cow position: | chr9:25756224-25755827 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 270, 150 |
| Conread position: | 99-519 |
| Cow position: | chr9:59442848-59443264 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 67 |
| Conread position: | 109-495 |
| Cow position: | chr9:132913-132525 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 221, 154 |
| Conread position: | 125-521 |
| Cow position: | chr9:832406-831996 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 133-495 |
| Cow position: | chr9:46626782-46626418 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 190, 11 |
| Conread position: | 134-495 |
| Cow position: | chr9:34243584-34243219 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 188, 129 |
| Conread position: | 145-489 |
| Cow position: | chr9:6831475-6831137 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 182-489 |
| Cow position: | chr9:59175059-59174751 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 191-473 |
| Cow position: | chr9:223451-223165 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 130, 78 |
| Conread position: | 199-489 |
| Cow position: | chr9:3155191-3155479 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 207-489 |
| Cow position: | chr9:37130392-37130110 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 207-503 |
| Cow position: | chr9:15071659-15071954 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 209-520 |
| Cow position: | chr9:8969914-8969597 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 209-520 |
| Cow position: | chr9:10314536-10314840 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 160, 14 |
| Conread position: | 224-489 |
| Cow position: | chr9:9012251-9012514 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 226-489 |
| Cow position: | chr9:6249291-6249555 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 226-489 |
| Cow position: | chr9:28020688-28020953 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 238-514 |
| Cow position: | chr9:1294732-1294453 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 67 |
| Conread position: | 263-489 |
| Cow position: | chr9:22650096-22650330 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 266-489 |
| Cow position: | chr9:18510547-18510318 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 297-489 |
| Cow position: | chr9:42568077-42568279 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 325-469 |
| Cow position: | chr9:240836-240690 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 331-494 |
| Cow position: | chr9:13219608-13219775 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 335-504 |
| Cow position: | chr9:34107607-34107434 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 335-518 |
| Cow position: | chr9:54359854-54360041 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 341-489 |
| Cow position: | chr9:42308936-42309088 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 343-489 |
| Cow position: | chr9:29629491-29629341 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.