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Cow genome map

           
Conread name:
           
rsin35_c10.y1
        

               
Conread position:
               
82-340
               

               
Cow position:
               
chr11:3283289-3283034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
88-344
               

               
Cow position:
               
chr11:58111707-58111949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr11:70513840-70513601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
103-220
               

               
Cow position:
               
chr11:17369750-17369633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
103-223
               

               
Cow position:
               
chr11:17859924-17860049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
103-227
               

               
Cow position:
               
chr11:37459281-37459156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
103-274
               

               
Cow position:
               
chr11:70837615-70837789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr11:13500275-13500015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr11:32782659-32782878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr11:56895744-56895969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
226, 67
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr11:31326235-31326018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
118-230
               

               
Cow position:
               
chr11:68909325-68909437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
121-225
               

               
Cow position:
               
chr11:24551599-24551493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
121-340
               

               
Cow position:
               
chr11:47110460-47110258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
121-343
               

               
Cow position:
               
chr11:36250977-36251203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr11:63550065-63549868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
124-250
               

               
Cow position:
               
chr11:34623420-34623291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
125-350
               

               
Cow position:
               
chr11:53778822-53778616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
126-263
               

               
Cow position:
               
chr11:6245523-6245388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr11:46884598-46884375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr11:74379095-74378874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
127-304
               

               
Cow position:
               
chr11:33686168-33686343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
127-311
               

               
Cow position:
               
chr11:17563433-17563257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr11:62226211-62226000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
127-347
               

               
Cow position:
               
chr11:67312989-67312783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
128-226
               

               
Cow position:
               
chr11:65431719-65431618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
128-233
               

               
Cow position:
               
chr11:22720195-22720090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
128-344
               

               
Cow position:
               
chr11:51627203-51627002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
128-350
               

               
Cow position:
               
chr11:4436964-4436747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
129-232
               

               
Cow position:
               
chr11:30528802-30528697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
129-305
               

               
Cow position:
               
chr11:70710010-70709832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
129-331
               

               
Cow position:
               
chr11:73977081-73977282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
129-334
               

               
Cow position:
               
chr11:13843671-13843463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
129-336
               

               
Cow position:
               
chr11:33340920-33341131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
129-343
               

               
Cow position:
               
chr11:37982348-37982572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
129-350
               

               
Cow position:
               
chr11:53717592-53717807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
130-224
               

               
Cow position:
               
chr11:50197314-50197409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
130-230
               

               
Cow position:
               
chr11:16315072-16314971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
130-230
               

               
Cow position:
               
chr11:22102559-22102661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
130-230
               

               
Cow position:
               
chr11:25968655-25968756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
130-253
               

               
Cow position:
               
chr11:23063841-23063964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
130-263
               

               
Cow position:
               
chr11:29983410-29983542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
130-301
               

               
Cow position:
               
chr11:59702716-59702539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
130-308
               

               
Cow position:
               
chr11:30888063-30888238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
130-313
               

               
Cow position:
               
chr11:17465881-17466053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr11:10078854-10078668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr11:43430238-43430422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
130-332
               

               
Cow position:
               
chr11:47883021-47882821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
130-344
               

               
Cow position:
               
chr11:18777391-18777592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr11:6267408-6267198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr11:62778672-62778443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr11:64351564-64351788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
130-350
               

               
Cow position:
               
chr11:81763069-81762861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
130-350
               

               
Cow position:
               
chr11:84775287-84775074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr11:58938518-58938746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
131-250
               

               
Cow position:
               
chr11:3234336-3234216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
131-272
               

               
Cow position:
               
chr11:54219207-54219065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr11:48233035-48232830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr11:61178586-61178360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr11:36917566-36917777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr11:59916367-59916145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
131-359
               

               
Cow position:
               
chr11:52415646-52415422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
132-226
               

               
Cow position:
               
chr11:62742450-62742547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
132-250
               

               
Cow position:
               
chr11:480673-480551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
132-315
               

               
Cow position:
               
chr11:11483517-11483346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr11:62749254-62749453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr11:75246566-75246367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
132-336
               

               
Cow position:
               
chr11:17638322-17638521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 56
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr11:47784976-47784780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
132-350
               

               
Cow position:
               
chr11:65842860-65843074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
133-229
               

               
Cow position:
               
chr11:47904430-47904334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
133-314
               

               
Cow position:
               
chr11:17195621-17195795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
133-315
               

               
Cow position:
               
chr11:63640663-63640838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr11:42786487-42786677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
133-341
               

               
Cow position:
               
chr11:4429928-4430127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
133-343
               

               
Cow position:
               
chr11:47314230-47314426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
134-350
               

               
Cow position:
               
chr11:6202650-6202442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
134-365
               

               
Cow position:
               
chr11:49486983-49486764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
135-311
               

               
Cow position:
               
chr11:21816842-21817023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
135-329
               

               
Cow position:
               
chr11:21893955-21894140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr11:58173829-58173628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
136-315
               

               
Cow position:
               
chr11:14466264-14466452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
136-315
               

               
Cow position:
               
chr11:29699495-29699665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
136-315
               

               
Cow position:
               
chr11:30597227-30597062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
136-337
               

               
Cow position:
               
chr11:82730792-82730985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
136-347
               

               
Cow position:
               
chr11:17321861-17321650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
136-359
               

               
Cow position:
               
chr11:64867800-64868032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
137-229
               

               
Cow position:
               
chr11:51683407-51683314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
137-250
               

               
Cow position:
               
chr11:17991417-17991302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
137-256
               

               
Cow position:
               
chr11:30111803-30111685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
137-336
               

               
Cow position:
               
chr11:41293613-41293804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
137-336
               

               
Cow position:
               
chr11:41427117-41426915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
137-336
               

               
Cow position:
               
chr11:69076124-69075924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr11:36849148-36848922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
137-347
               

               
Cow position:
               
chr11:62609830-62609607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
137-347
               

               
Cow position:
               
chr11:69119511-69119296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr11:71456021-71455818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
138-277
               

               
Cow position:
               
chr11:76896548-76896685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
138-288
               

               
Cow position:
               
chr11:76995104-76995257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
138-300
               

               
Cow position:
               
chr11:19788344-19788189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chr11:33311199-33311019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
138-343
               

               
Cow position:
               
chr11:61454312-61454510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
138-350
               

               
Cow position:
               
chr11:7013538-7013745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr11:83230181-83230395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr11:48650175-48649972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
141-236
               

               
Cow position:
               
chr11:8584502-8584406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-245
               

               
Cow position:
               
chr11:48932402-48932507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-313
               

               
Cow position:
               
chr11:81748127-81747958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
141-315
               

               
Cow position:
               
chr11:27932489-27932316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
141-315
               

               
Cow position:
               
chr11:80596542-80596372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
141-347
               

               
Cow position:
               
chr11:71345128-71345321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
141-359
               

               
Cow position:
               
chr11:22747120-22747339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
141-367
               

               
Cow position:
               
chr11:35073381-35073609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
142-230
               

               
Cow position:
               
chr11:58186058-58185969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
142-269
               

               
Cow position:
               
chr11:8419744-8419868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
143-259
               

               
Cow position:
               
chr11:37546016-37546131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
143-343
               

               
Cow position:
               
chr11:17831021-17831216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
143-343
               

               
Cow position:
               
chr11:23137841-23138049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
143-343
               

               
Cow position:
               
chr11:79869529-79869331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
143-343
               

               
Cow position:
               
chr11:81606063-81605864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
143-344
               

               
Cow position:
               
chr11:83578961-83579171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
143-350
               

               
Cow position:
               
chr11:34693062-34692853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
143-350
               

               
Cow position:
               
chr11:36286889-36286695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
143-353
               

               
Cow position:
               
chr11:79466407-79466208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
144-233
               

               
Cow position:
               
chr11:67600962-67600872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-344
               

               
Cow position:
               
chr11:4652763-4652967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-347
               

               
Cow position:
               
chr11:16906847-16907048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
144-350
               

               
Cow position:
               
chr11:73983806-73984004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr11:434676-434883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
145-301
               

               
Cow position:
               
chr11:71167303-71167459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
145-309
               

               
Cow position:
               
chr11:81173103-81173266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr11:26845386-26845580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr11:71443039-71443226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr11:77208270-77208088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr11:2639461-2639651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
145-350
               

               
Cow position:
               
chr11:69307713-69307513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
146-335
               

               
Cow position:
               
chr11:44234557-44234370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
146-337
               

               
Cow position:
               
chr11:952468-952282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr11:47164705-47164913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
146-350
               

               
Cow position:
               
chr11:36065818-36066009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
147-350
               

               
Cow position:
               
chr11:70517397-70517594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
149-298
               

               
Cow position:
               
chr11:58990690-58990544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
149-336
               

               
Cow position:
               
chr11:377441-377628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
149-336
               

               
Cow position:
               
chr11:10363169-10363372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
149-350
               

               
Cow position:
               
chr11:72375487-72375683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
150-304
               

               
Cow position:
               
chr11:62487355-62487203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
150-348
               

               
Cow position:
               
chr11:62754120-62754316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
151-326
               

               
Cow position:
               
chr11:82999548-82999714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
151-343
               

               
Cow position:
               
chr11:50073132-50072943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
153-244
               

               
Cow position:
               
chr11:77468242-77468334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
153-315
               

               
Cow position:
               
chr11:2864198-2864038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
154-314
               

               
Cow position:
               
chr11:73924358-73924526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
158-332
               

               
Cow position:
               
chr11:45437478-45437296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr11:19606764-19606591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr11:6092571-6092373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr11:6024393-6024542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
159-313
               

               
Cow position:
               
chr11:46113083-46113230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
159-315
               

               
Cow position:
               
chr11:34144750-34144890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr11:5249347-5249526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
159-350
               

               
Cow position:
               
chr11:6633895-6633710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
159-350
               

               
Cow position:
               
chr11:35363666-35363481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
163-329
               

               
Cow position:
               
chr11:65803681-65803850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
165-331
               

               
Cow position:
               
chr11:2832495-2832674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
168-350
               

               
Cow position:
               
chr11:61958564-61958744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
171-359
               

               
Cow position:
               
chr11:42067228-42067043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
173-320
               

               
Cow position:
               
chr11:36128581-36128434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr11:63909502-63909665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr11:14093958-14094102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
182-350
               

               
Cow position:
               
chr11:63917315-63917477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
203-336
               

               
Cow position:
               
chr11:28644233-28644101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
203-341
               

               
Cow position:
               
chr11:34623316-34623179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
203-350
               

               
Cow position:
               
chr11:79018913-79019059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
205-347
               

               
Cow position:
               
chr11:56290655-56290514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
209-347
               

               
Cow position:
               
chr11:35860721-35860585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
211-343
               

               
Cow position:
               
chr11:77128798-77128666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
211-350
               

               
Cow position:
               
chr11:40478714-40478853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
212-343
               

               
Cow position:
               
chr11:70826085-70825954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
212-347
               

               
Cow position:
               
chr11:36658688-36658820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
224-343
               

               
Cow position:
               
chr11:47837444-47837325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
224-345
               

               
Cow position:
               
chr11:41983041-41983161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
229-343
               

               
Cow position:
               
chr11:54334448-54334334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
230-347
               

               
Cow position:
               
chr11:47585944-47586056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
236-347
               

               
Cow position:
               
chr11:35669840-35669949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
241-372
               

               
Cow position:
               
chr11:63485045-63484916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
243-348
               

               
Cow position:
               
chr11:29946807-29946912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.