Cow genome map
| Conread name: | rsin35_c10.y1 |
| Conread position: | 93-226 |
| Cow position: | chr13:3153484-3153616 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 97-340 |
| Cow position: | chr13:29957752-29957983 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 102-218 |
| Cow position: | chr13:24714996-24715110 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 102-226 |
| Cow position: | chr13:11547576-11547452 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 48 |
| Conread position: | 103-350 |
| Cow position: | chr13:19750446-19750683 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 107-336 |
| Cow position: | chr13:26422787-26423005 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 110-229 |
| Cow position: | chr13:28536569-28536449 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 110-356 |
| Cow position: | chr13:38702879-38702654 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 112-331 |
| Cow position: | chr13:45023468-45023260 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 113-304 |
| Cow position: | chr13:61124649-61124829 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 113-315 |
| Cow position: | chr13:26742878-26743080 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 116-359 |
| Cow position: | chr13:51940470-51940713 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 222, 72 |
| Conread position: | 119-335 |
| Cow position: | chr13:21192841-21193047 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 119-336 |
| Cow position: | chr13:17619640-17619846 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 122-347 |
| Cow position: | chr13:52338617-52338834 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 125-230 |
| Cow position: | chr13:40541343-40541236 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 125-350 |
| Cow position: | chr13:32017749-32017544 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 103 |
| Conread position: | 126-228 |
| Cow position: | chr13:17745026-17745129 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 126-310 |
| Cow position: | chr13:3948240-3948431 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 126-315 |
| Cow position: | chr13:50768164-50768353 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 126-340 |
| Cow position: | chr13:60973831-60974037 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 126-355 |
| Cow position: | chr13:17971269-17971055 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 126-358 |
| Cow position: | chr13:10986738-10986526 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 128-315 |
| Cow position: | chr13:20706457-20706272 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 128-345 |
| Cow position: | chr13:5079610-5079402 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 129-219 |
| Cow position: | chr13:6270443-6270352 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 129-260 |
| Cow position: | chr13:46143164-46143295 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 129-311 |
| Cow position: | chr13:57475645-57475477 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 129-331 |
| Cow position: | chr13:9492511-9492720 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 129-344 |
| Cow position: | chr13:17619362-17619574 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 129-350 |
| Cow position: | chr13:11643682-11643907 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 129-354 |
| Cow position: | chr13:47643820-47644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 174, 49 |
| Conread position: | 129-357 |
| Cow position: | chr13:8567468-8567698 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 116 |
| Conread position: | 130-226 |
| Cow position: | chr13:28605623-28605526 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 130-226 |
| Cow position: | chr13:52929204-52929300 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 130-228 |
| Cow position: | chr13:25313380-25313279 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 130-230 |
| Cow position: | chr13:20654090-20653989 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 130-242 |
| Cow position: | chr13:45352799-45352912 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 130-250 |
| Cow position: | chr13:57700003-57700125 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 130-255 |
| Cow position: | chr13:28081489-28081614 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 130-255 |
| Cow position: | chr13:41616633-41616505 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 130-265 |
| Cow position: | chr13:12302612-12302477 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 130-332 |
| Cow position: | chr13:18906604-18906802 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 130-332 |
| Cow position: | chr13:29908207-29908004 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 130-335 |
| Cow position: | chr13:8478154-8478357 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 130-336 |
| Cow position: | chr13:8350074-8350277 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 130-336 |
| Cow position: | chr13:49255492-49255286 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 130-336 |
| Cow position: | chr13:55316450-55316237 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 130-340 |
| Cow position: | chr13:21024755-21024945 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 130-343 |
| Cow position: | chr13:18049479-18049261 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 130-344 |
| Cow position: | chr13:19012337-19012539 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 130-350 |
| Cow position: | chr13:32387270-32387036 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 130-350 |
| Cow position: | chr13:37381546-37381769 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 130-350 |
| Cow position: | chr13:40348662-40348871 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 131-227 |
| Cow position: | chr13:11146826-11146923 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 131-230 |
| Cow position: | chr13:620475-620375 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 131-232 |
| Cow position: | chr13:57986160-57986057 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 131-236 |
| Cow position: | chr13:9707975-9707867 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 131-262 |
| Cow position: | chr13:45439304-45439436 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 131-337 |
| Cow position: | chr13:19467588-19467383 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 131-339 |
| Cow position: | chr13:51814199-51813974 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 131-342 |
| Cow position: | chr13:32186035-32186241 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 131-347 |
| Cow position: | chr13:9266075-9265862 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 131-350 |
| Cow position: | chr13:39398404-39398619 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 132-220 |
| Cow position: | chr13:9124702-9124791 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-230 |
| Cow position: | chr13:12876202-12876103 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-308 |
| Cow position: | chr13:24759571-24759405 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 132-316 |
| Cow position: | chr13:2136861-2137043 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 132-347 |
| Cow position: | chr13:55727635-55727867 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 133-340 |
| Cow position: | chr13:26365642-26365863 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 134-340 |
| Cow position: | chr13:54145705-54145514 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 135-224 |
| Cow position: | chr13:14575992-14576082 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 135-315 |
| Cow position: | chr13:37021252-37021063 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 135-331 |
| Cow position: | chr13:37621599-37621408 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 135-350 |
| Cow position: | chr13:42640146-42640354 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 136-230 |
| Cow position: | chr13:10925145-10925050 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 136-336 |
| Cow position: | chr13:37984373-37984175 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 136-348 |
| Cow position: | chr13:45725650-45725860 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 41 |
| Conread position: | 137-233 |
| Cow position: | chr13:21235891-21235791 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 137-308 |
| Cow position: | chr13:37820780-37820608 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 115 |
| Conread position: | 137-315 |
| Cow position: | chr13:56155392-56155218 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 137-343 |
| Cow position: | chr13:21283962-21283742 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 137-347 |
| Cow position: | chr13:20684372-20684168 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 138-301 |
| Cow position: | chr13:15104793-15104957 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 138-315 |
| Cow position: | chr13:8609790-8609614 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 138-328 |
| Cow position: | chr13:53309373-53309180 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 138-332 |
| Cow position: | chr13:13466014-13465816 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 138-336 |
| Cow position: | chr13:3315906-3315721 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 138-336 |
| Cow position: | chr13:6087134-6086939 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 138-342 |
| Cow position: | chr13:20531716-20531513 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 138-347 |
| Cow position: | chr13:42018060-42017844 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 187 |
| Conread position: | 138-356 |
| Cow position: | chr13:42613843-42614058 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 139-313 |
| Cow position: | chr13:4420082-4420262 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 139-336 |
| Cow position: | chr13:37517406-37517223 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 139-347 |
| Cow position: | chr13:11532443-11532653 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 139-347 |
| Cow position: | chr13:11538587-11538797 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 141-336 |
| Cow position: | chr13:18696606-18696794 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 141-336 |
| Cow position: | chr13:20679097-20679293 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 141-342 |
| Cow position: | chr13:7076023-7076218 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 142-250 |
| Cow position: | chr13:49253391-49253502 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 142-258 |
| Cow position: | chr13:27174060-27173941 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 142-332 |
| Cow position: | chr13:46330155-46329972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 142-350 |
| Cow position: | chr13:51227984-51227772 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 143-264 |
| Cow position: | chr13:372626-372506 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 143-295 |
| Cow position: | chr13:29889009-29888866 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 143-315 |
| Cow position: | chr13:11071443-11071267 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 154 |
| Conread position: | 143-315 |
| Cow position: | chr13:52198890-52199060 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 143-331 |
| Cow position: | chr13:52881099-52880916 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 143-350 |
| Cow position: | chr13:13775468-13775275 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 143-350 |
| Cow position: | chr13:17563503-17563707 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 143-350 |
| Cow position: | chr13:40154954-40154762 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 143-350 |
| Cow position: | chr13:43525464-43525267 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 144-315 |
| Cow position: | chr13:4980800-4980980 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 144-336 |
| Cow position: | chr13:4718983-4719178 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 144-336 |
| Cow position: | chr13:17229486-17229671 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 144-350 |
| Cow position: | chr13:185291-185498 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 145-356 |
| Cow position: | chr13:45142149-45141951 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 149-279 |
| Cow position: | chr13:9589116-9589243 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 149-310 |
| Cow position: | chr13:54689314-54689471 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 149-331 |
| Cow position: | chr13:13181959-13182146 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 149-335 |
| Cow position: | chr13:18701143-18701325 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 149-340 |
| Cow position: | chr13:27419299-27419118 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 149-347 |
| Cow position: | chr13:25450724-25450521 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 131 |
| Conread position: | 149-347 |
| Cow position: | chr13:29631379-29631573 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 149-347 |
| Cow position: | chr13:52586271-52586072 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 149-350 |
| Cow position: | chr13:8354969-8355172 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 171 |
| Conread position: | 149-350 |
| Cow position: | chr13:51116265-51116056 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 150-347 |
| Cow position: | chr13:5005774-5005966 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 153-336 |
| Cow position: | chr13:40943016-40943197 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 154-350 |
| Cow position: | chr13:2413799-2413997 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 156-350 |
| Cow position: | chr13:1075278-1075071 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 158-295 |
| Cow position: | chr13:33352565-33352427 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 158-348 |
| Cow position: | chr13:38873157-38872978 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 164-332 |
| Cow position: | chr13:18172123-18172286 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 164-347 |
| Cow position: | chr13:1043189-1043004 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 170-334 |
| Cow position: | chr13:23167309-23167149 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 200-315 |
| Cow position: | chr13:17439951-17439835 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 203-347 |
| Cow position: | chr13:36771597-36771457 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 203-350 |
| Cow position: | chr13:43829065-43829212 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-335 |
| Cow position: | chr13:47243728-47243598 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 209-350 |
| Cow position: | chr13:32363352-32363212 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 210-344 |
| Cow position: | chr13:41616215-41616085 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 212-344 |
| Cow position: | chr13:14771281-14771414 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 215-350 |
| Cow position: | chr13:37640422-37640557 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 219-350 |
| Cow position: | chr13:21294913-21295043 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 220-350 |
| Cow position: | chr13:6389235-6389363 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 224-331 |
| Cow position: | chr13:563518-563412 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 230-350 |
| Cow position: | chr13:17159029-17158910 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 230-350 |
| Cow position: | chr13:21275708-21275827 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 230-350 |
| Cow position: | chr13:24230062-24230182 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-341 |
| Cow position: | chr13:12925628-12925738 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.