Cow genome map

Conread name: rsin35_c10.y1

Conread position: 96-247
Cow position: chr14:23695266-23695410 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 28

Conread position: 111-226
Cow position: chr14:36443209-36443092 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 112-347
Cow position: chr14:22941933-22941706 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 105

Conread position: 114-226
Cow position: chr14:27364391-27364502 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 15

Conread position: 114-312
Cow position: chr14:27312204-27312400 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 35

Conread position: 123-271
Cow position: chr14:26258522-26258374 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 92

Conread position: 125-237
Cow position: chr14:37152110-37151999 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 5

Conread position: 126-226
Cow position: chr14:8949472-8949578 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 127-331
Cow position: chr14:33827935-33828129 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 10

Conread position: 127-352
Cow position: chr14:34586117-34586340 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 65

Conread position: 128-350
Cow position: chr14:31138945-31138716 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 166

Conread position: 129-232
Cow position: chr14:19644314-19644419 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 129-250
Cow position: chr14:17238132-17238252 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 12

Conread position: 129-343
Cow position: chr14:44153160-44152957 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 12

Conread position: 130-230
Cow position: chr14:11470322-11470221 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 130-230
Cow position: chr14:18412766-18412665 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 130-230
Cow position: chr14:23100441-23100541 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 31

Conread position: 130-230
Cow position: chr14:45955116-45955217 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 19

Conread position: 130-245
Cow position: chr14:4044211-4044327 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 130-253
Cow position: chr14:36309350-36309228 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 49

Conread position: 130-283
Cow position: chr14:15258796-15258941 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 130-308
Cow position: chr14:37109964-37109788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 122

Conread position: 130-331
Cow position: chr14:28987519-28987710 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 11

Conread position: 130-331
Cow position: chr14:34096754-34096558 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 11

Conread position: 130-332
Cow position: chr14:27274962-27275169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 137

Conread position: 130-336
Cow position: chr14:9029841-9029636 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 11

Conread position: 130-343
Cow position: chr14:18657817-18657588 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 10

Conread position: 130-347
Cow position: chr14:22997770-22997555 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 109

Conread position: 130-347
Cow position: chr14:34331518-34331304 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 85

Conread position: 130-349
Cow position: chr14:48899995-48900200 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 55

Conread position: 130-358
Cow position: chr14:29631731-29631970 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 130-359
Cow position: chr14:8027738-8027526 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 19

Conread position: 130-360
Cow position: chr14:9770140-9769920 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 11

Conread position: 131-315
Cow position: chr14:24746285-24746456 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 106

Conread position: 132-220
Cow position: chr14:38411135-38411224 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 132-313
Cow position: chr14:6226810-6226623 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 132-315
Cow position: chr14:5639572-5639387 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 16

Conread position: 132-336
Cow position: chr14:29238960-29239165 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 24

Conread position: 132-354
Cow position: chr14:20362145-20361937 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 11

Conread position: 133-244
Cow position: chr14:20599910-20600022 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 134-332
Cow position: chr14:16340815-16341002 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 8

Conread position: 134-353
Cow position: chr14:16749861-16749657 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 28

Conread position: 135-248
Cow position: chr14:4209290-4209404 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 135-250
Cow position: chr14:12034963-12035078 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 69

Conread position: 137-250
Cow position: chr14:42435339-42435450 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 37

Conread position: 137-264
Cow position: chr14:23038899-23038768 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 137-315
Cow position: chr14:33758181-33758359 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 20

Conread position: 137-350
Cow position: chr14:27044955-27044747 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 78

Conread position: 137-350
Cow position: chr14:37436888-37436685 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 96

Conread position: 137-359
Cow position: chr14:39041196-39041403 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 22

Conread position: 138-344
Cow position: chr14:37155681-37155896 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 188

Conread position: 138-350
Cow position: chr14:37884096-37883891 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 36

Conread position: 139-226
Cow position: chr14:29964854-29964942 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 141-331
Cow position: chr14:33326793-33326605 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 159

Conread position: 141-336
Cow position: chr14:10078093-10078279 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 72

Conread position: 141-339
Cow position: chr14:3878067-3878265 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 9

Conread position: 142-315
Cow position: chr14:38438417-38438588 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 83

Conread position: 142-350
Cow position: chr14:42330186-42330380 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 74

Conread position: 143-241
Cow position: chr14:15795441-15795342 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 91

Conread position: 143-250
Cow position: chr14:27592371-27592263 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 143-315
Cow position: chr14:48762209-48762379 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 112

Conread position: 143-343
Cow position: chr14:18763623-18763419 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 128

Conread position: 143-350
Cow position: chr14:34983689-34983893 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 173, 60

Conread position: 143-359
Cow position: chr14:34200018-34199809 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 73

Conread position: 144-250
Cow position: chr14:14268940-14269046 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 90

Conread position: 144-298
Cow position: chr14:11988472-11988625 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 131

Conread position: 144-327
Cow position: chr14:47200292-47200122 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 46, 64

Conread position: 145-357
Cow position: chr14:30260593-30260800 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 72

Conread position: 146-347
Cow position: chr14:16457349-16457541 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 54

Conread position: 147-256
Cow position: chr14:5034028-5033920 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 147-274
Cow position: chr14:33688745-33688621 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 35

Conread position: 147-332
Cow position: chr14:8749892-8750082 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 174

Conread position: 147-343
Cow position: chr14:22582969-22583168 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 43

Conread position: 148-340
Cow position: chr14:24981299-24981474 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 149-315
Cow position: chr14:39926028-39926198 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 51

Conread position: 149-336
Cow position: chr14:45577269-45577081 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 102

Conread position: 149-347
Cow position: chr14:20482005-20481817 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 59

Conread position: 149-347
Cow position: chr14:38286138-38285947 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 92

Conread position: 149-350
Cow position: chr14:20070909-20071096 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 30

Conread position: 149-350
Cow position: chr14:36708947-36709149 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 97

Conread position: 151-336
Cow position: chr14:21963969-21964148 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 28

Conread position: 155-332
Cow position: chr14:11975902-11975725 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 18

Conread position: 159-343
Cow position: chr14:38674073-38673901 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 9

Conread position: 161-350
Cow position: chr14:19129347-19129531 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 50

Conread position: 176-335
Cow position: chr14:25778961-25779112 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 73

Conread position: 179-350
Cow position: chr14:27076843-27077002 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 37

Conread position: 204-336
Cow position: chr14:41191216-41191084 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 57

Conread position: 204-403
Cow position: chr14:14280111-14280310 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 50

Conread position: 210-331
Cow position: chr14:42276506-42276632 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 210-343
Cow position: chr14:16761727-16761591 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 211-347
Cow position: chr14:4990889-4991024 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 214-347
Cow position: chr14:26097806-26097671 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 214-350
Cow position: chr14:42436915-42437050 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 216-343
Cow position: chr14:25824586-25824714 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 59

Conread position: 231-343
Cow position: chr14:24785567-24785677 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 107, 16

Conread position: 237-340
Cow position: chr14:14316800-14316902 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.