Cow genome map

Conread name: rsin35_c10.y1

Conread position: 96-339
Cow position: chr23:38502826-38503071 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 32

Conread position: 98-250
Cow position: chr23:14739764-14739607 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 25

Conread position: 100-337
Cow position: chr23:41099490-41099743 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 90

Conread position: 111-286
Cow position: chr23:1533409-1533583 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 32

Conread position: 111-332
Cow position: chr23:3408644-3408873 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 142

Conread position: 112-336
Cow position: chr23:11314785-11315001 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 16

Conread position: 113-350
Cow position: chr23:21336234-21336464 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 12

Conread position: 119-235
Cow position: chr23:40951231-40951114 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 120-350
Cow position: chr23:12334447-12334230 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 10

Conread position: 121-229
Cow position: chr23:22550813-22550704 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 122-347
Cow position: chr23:1397783-1398016 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 126-226
Cow position: chr23:3890352-3890452 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 23

Conread position: 126-257
Cow position: chr23:26986051-26986178 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 127-337
Cow position: chr23:3281889-3282089 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 90

Conread position: 127-342
Cow position: chr23:33673112-33672899 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 112

Conread position: 128-271
Cow position: chr23:1742834-1742692 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 85

Conread position: 129-228
Cow position: chr23:2563882-2563782 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 129-315
Cow position: chr23:22105801-22105615 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 14

Conread position: 129-350
Cow position: chr23:14164159-14164376 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 20

Conread position: 130-224
Cow position: chr23:23724371-23724468 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 130-230
Cow position: chr23:2471222-2471121 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 130-230
Cow position: chr23:30617258-30617360 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 130-230
Cow position: chr23:32621505-32621404 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 130-271
Cow position: chr23:18476412-18476272 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 19

Conread position: 130-336
Cow position: chr23:20744365-20744559 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 82

Conread position: 130-336
Cow position: chr23:21502390-21502597 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 18

Conread position: 130-342
Cow position: chr23:41219974-41220190 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 130-347
Cow position: chr23:3244236-3244446 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 13

Conread position: 130-350
Cow position: chr23:35253926-35254148 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 86

Conread position: 130-351
Cow position: chr23:18106725-18106951 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 60, 19

Conread position: 130-353
Cow position: chr23:13673798-13674015 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 28

Conread position: 131-251
Cow position: chr23:31299460-31299338 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 131-311
Cow position: chr23:2487754-2487933 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 12

Conread position: 131-313
Cow position: chr23:18354894-18354706 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 162

Conread position: 131-320
Cow position: chr23:5608838-5609030 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 18

Conread position: 131-350
Cow position: chr23:18679363-18679150 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 92

Conread position: 132-226
Cow position: chr23:307673-307578 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 132-292
Cow position: chr23:4578819-4578990 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 132-313
Cow position: chr23:5449935-5449761 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 38

Conread position: 132-313
Cow position: chr23:36172748-36172581 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 46

Conread position: 132-330
Cow position: chr23:19739348-19739526 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 17

Conread position: 132-334
Cow position: chr23:29972614-29972423 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 73

Conread position: 132-350
Cow position: chr23:13511968-13511742 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 18

Conread position: 135-226
Cow position: chr23:3244703-3244795 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 135-350
Cow position: chr23:1768064-1767848 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 115

Conread position: 137-233
Cow position: chr23:25864484-25864581 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 137-256
Cow position: chr23:532901-533021 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 137-294
Cow position: chr23:18293211-18293370 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 137

Conread position: 137-336
Cow position: chr23:24927036-24926848 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 137-342
Cow position: chr23:17591030-17590828 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 44

Conread position: 137-346
Cow position: chr23:27790250-27790040 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 33

Conread position: 137-350
Cow position: chr23:360471-360667 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 34

Conread position: 137-350
Cow position: chr23:13555223-13555418 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 137-350
Cow position: chr23:36018375-36018172 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 98

Conread position: 137-357
Cow position: chr23:27144906-27145133 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 53, 35

Conread position: 138-315
Cow position: chr23:20002491-20002309 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 138-350
Cow position: chr23:18402054-18402270 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 41

Conread position: 138-350
Cow position: chr23:20604478-20604699 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 160

Conread position: 139-351
Cow position: chr23:27030514-27030310 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 108

Conread position: 141-315
Cow position: chr23:10876621-10876454 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 15

Conread position: 142-250
Cow position: chr23:40217146-40217255 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 142-347
Cow position: chr23:4241410-4241619 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 125

Conread position: 143-232
Cow position: chr23:35656613-35656523 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 143-301
Cow position: chr23:19274301-19274145 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 70

Conread position: 143-316
Cow position: chr23:21413101-21413267 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 143-345
Cow position: chr23:9734624-9734434 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 83

Conread position: 143-350
Cow position: chr23:38454959-38455159 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 73

Conread position: 144-249
Cow position: chr23:4336354-4336248 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 91

Conread position: 144-254
Cow position: chr23:18710269-18710383 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 144-315
Cow position: chr23:21438726-21438552 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 33

Conread position: 144-343
Cow position: chr23:12975781-12975583 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 20

Conread position: 144-350
Cow position: chr23:12602232-12602455 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 144-350
Cow position: chr23:24479720-24479938 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 145-332
Cow position: chr23:3814059-3814243 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 68

Conread position: 145-348
Cow position: chr23:3431290-3431089 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 96

Conread position: 146-315
Cow position: chr23:32094927-32095093 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 18

Conread position: 147-315
Cow position: chr23:4608032-4608188 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 75

Conread position: 149-239
Cow position: chr23:1871738-1871829 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 149-350
Cow position: chr23:23114278-23114078 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 65

Conread position: 149-351
Cow position: chr23:26693965-26694163 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 31

Conread position: 151-350
Cow position: chr23:3835385-3835575 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 59

Conread position: 153-347
Cow position: chr23:25938181-25938366 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 26

Conread position: 153-350
Cow position: chr23:26591701-26591891 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 57

Conread position: 158-336
Cow position: chr23:30110055-30109879 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 22

Conread position: 158-350
Cow position: chr23:35247572-35247387 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 55

Conread position: 164-311
Cow position: chr23:24646809-24646950 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 174-343
Cow position: chr23:5203735-5203906 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 121

Conread position: 179-343
Cow position: chr23:30951148-30950980 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 37

Conread position: 183-336
Cow position: chr23:35199522-35199374 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 203-340
Cow position: chr23:32546102-32546239 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 12

Conread position: 206-387
Cow position: chr23:38846004-38845824 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 210-350
Cow position: chr23:38845758-38845618 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 15

Conread position: 213-331
Cow position: chr23:21439845-21439963 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 215-343
Cow position: chr23:4336220-4336095 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 217-347
Cow position: chr23:30662486-30662616 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 218-332
Cow position: chr23:3471157-3471044 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 220-330
Cow position: chr23:18787137-18787246 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 40

Conread position: 224-343
Cow position: chr23:1936499-1936617 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 22

Conread position: 235-345
Cow position: chr23:13599474-13599366 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 241-350
Cow position: chr23:18417220-18417112 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.