Cow genome map

Conread name: rsin35_c10.y1

Conread position: 67-283
Cow position: chr24:35466745-35466956 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 177

Conread position: 83-315
Cow position: chr24:38006476-38006690 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 106, 11

Conread position: 102-347
Cow position: chr24:7390103-7390341 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 78

Conread position: 112-336
Cow position: chr24:28689901-28689675 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 25

Conread position: 120-336
Cow position: chr24:873683-873455 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 121-340
Cow position: chr24:1831338-1831563 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 27

Conread position: 121-344
Cow position: chr24:28470470-28470681 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 69, 20

Conread position: 122-350
Cow position: chr24:25142814-25142602 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 27

Conread position: 123-256
Cow position: chr24:39304714-39304847 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 122

Conread position: 126-239
Cow position: chr24:12828390-12828273 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 127-353
Cow position: chr24:18615207-18614991 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 14

Conread position: 128-347
Cow position: chr24:19779148-19779360 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 105

Conread position: 129-230
Cow position: chr24:12121090-12120988 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 129-275
Cow position: chr24:39841342-39841487 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 120

Conread position: 129-336
Cow position: chr24:14648133-14648352 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 160

Conread position: 130-230
Cow position: chr24:18484803-18484904 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 11

Conread position: 130-232
Cow position: chr24:28303171-28303275 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 130-308
Cow position: chr24:34533325-34533156 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 11

Conread position: 130-331
Cow position: chr24:38114627-38114840 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 144

Conread position: 130-332
Cow position: chr24:32204592-32204784 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 80

Conread position: 130-340
Cow position: chr24:16377544-16377341 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 92

Conread position: 130-343
Cow position: chr24:32890828-32891045 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 30

Conread position: 130-343
Cow position: chr24:34465305-34465507 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 19

Conread position: 130-350
Cow position: chr24:15264095-15263868 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 11

Conread position: 131-250
Cow position: chr24:16517661-16517781 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 131-315
Cow position: chr24:6450698-6450522 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 95

Conread position: 131-332
Cow position: chr24:18390089-18390294 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 130

Conread position: 131-336
Cow position: chr24:28186296-28186507 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 27

Conread position: 131-344
Cow position: chr24:19624053-19623854 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 19

Conread position: 132-230
Cow position: chr24:11028499-11028598 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 132-281
Cow position: chr24:27512050-27511903 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 11

Conread position: 133-228
Cow position: chr24:18324094-18324189 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 16

Conread position: 133-230
Cow position: chr24:18750896-18750799 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 16

Conread position: 133-341
Cow position: chr24:32818091-32818301 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 61

Conread position: 134-347
Cow position: chr24:24457056-24457254 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 43

Conread position: 134-355
Cow position: chr24:18313731-18313942 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 74

Conread position: 135-232
Cow position: chr24:43011179-43011279 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 135-347
Cow position: chr24:11119482-11119273 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 99

Conread position: 135-350
Cow position: chr24:34556245-34556029 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 8

Conread position: 135-350
Cow position: chr24:40404599-40404815 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 89

Conread position: 136-350
Cow position: chr24:13058245-13058016 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 213

Conread position: 137-313
Cow position: chr24:31822773-31822606 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 53, 111

Conread position: 137-315
Cow position: chr24:5683492-5683308 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 176

Conread position: 137-316
Cow position: chr24:18332936-18333109 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 41

Conread position: 137-331
Cow position: chr24:18328274-18328463 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 41

Conread position: 137-331
Cow position: chr24:27285007-27284828 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 86

Conread position: 137-336
Cow position: chr24:30203036-30202831 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 53, 144

Conread position: 137-347
Cow position: chr24:18696065-18695871 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 98

Conread position: 138-281
Cow position: chr24:21736864-21737009 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 138-316
Cow position: chr24:40185338-40185151 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 44

Conread position: 138-336
Cow position: chr24:40983340-40983137 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 138-337
Cow position: chr24:20969464-20969658 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 138-343
Cow position: chr24:16118582-16118359 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 11

Conread position: 138-345
Cow position: chr24:16895243-16895438 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 52

Conread position: 139-340
Cow position: chr24:31159811-31159618 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 49, 93

Conread position: 139-350
Cow position: chr24:256239-256019 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 31

Conread position: 141-227
Cow position: chr24:28045912-28045825 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 141-352
Cow position: chr24:41406073-41405884 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 197, 36

Conread position: 143-247
Cow position: chr24:18969936-18970041 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 143-315
Cow position: chr24:27168511-27168336 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 120

Conread position: 143-331
Cow position: chr24:39345167-39345363 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 56

Conread position: 143-343
Cow position: chr24:2675513-2675314 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 137

Conread position: 143-344
Cow position: chr24:43024458-43024259 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 105

Conread position: 144-239
Cow position: chr24:3162037-3161941 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 144-262
Cow position: chr24:7750997-7751117 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 144-313
Cow position: chr24:39905250-39905417 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 97

Conread position: 144-359
Cow position: chr24:15373604-15373389 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 46, 117

Conread position: 145-350
Cow position: chr24:27553275-27553088 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 145-350
Cow position: chr24:28289057-28289260 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 32

Conread position: 146-332
Cow position: chr24:33153976-33153787 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 147-310
Cow position: chr24:37073671-37073831 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 98

Conread position: 147-347
Cow position: chr24:24661945-24662135 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 147-350
Cow position: chr24:21263588-21263803 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 149-250
Cow position: chr24:216925-216823 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 149-332
Cow position: chr24:10840734-10840909 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 40, 59

Conread position: 149-353
Cow position: chr24:29595629-29595819 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 75

Conread position: 151-296
Cow position: chr24:39259904-39259747 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 151-340
Cow position: chr24:43200088-43200271 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 97

Conread position: 151-350
Cow position: chr24:33465427-33465625 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 12

Conread position: 153-336
Cow position: chr24:39791730-39791548 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 110

Conread position: 153-350
Cow position: chr24:14786583-14786372 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 157-313
Cow position: chr24:40207265-40207105 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 158-350
Cow position: chr24:18741403-18741579 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 53

Conread position: 159-336
Cow position: chr24:28043155-28042982 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 85

Conread position: 161-315
Cow position: chr24:21918022-21918169 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 29, 16

Conread position: 215-350
Cow position: chr24:22235594-22235460 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 217-337
Cow position: chr24:2353794-2353676 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 223-350
Cow position: chr24:34008454-34008580 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 224-347
Cow position: chr24:28326962-28327085 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 231-336
Cow position: chr24:19187048-19186944 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 235-353
Cow position: chr24:28024386-28024269 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.