Cow genome map

Conread name: rsin35_c10.y1

Conread position: 68-296
Cow position: chr25:28666743-28666519 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 10

Conread position: 94-226
Cow position: chr25:17725285-17725150 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 96-260
Cow position: chr25:14212578-14212745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 97-230
Cow position: chr25:18201682-18201815 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 81

Conread position: 97-236
Cow position: chr25:22577060-22577203 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 97-350
Cow position: chr25:22520603-22520352 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 93, 15

Conread position: 98-350
Cow position: chr25:20403914-20403673 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 118

Conread position: 101-348
Cow position: chr25:35109013-35109251 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 75

Conread position: 102-218
Cow position: chr25:31266117-31265998 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 102-226
Cow position: chr25:28939905-28940025 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 34

Conread position: 103-342
Cow position: chr25:32908193-32907960 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 47

Conread position: 112-359
Cow position: chr25:33773542-33773775 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 25

Conread position: 114-258
Cow position: chr25:25582139-25581988 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 116-231
Cow position: chr25:20132871-20132993 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 116-245
Cow position: chr25:33839991-33839858 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 116-350
Cow position: chr25:7470605-7470377 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 74, 25

Conread position: 117-349
Cow position: chr25:15218385-15218148 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 48

Conread position: 120-374
Cow position: chr25:19800005-19799746 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 78

Conread position: 121-230
Cow position: chr25:35762809-35762699 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 126-250
Cow position: chr25:13654110-13653988 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 24

Conread position: 126-284
Cow position: chr25:14212081-14211925 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 109

Conread position: 126-336
Cow position: chr25:30278982-30279179 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 15

Conread position: 126-344
Cow position: chr25:30619288-30619085 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 54

Conread position: 127-306
Cow position: chr25:19584585-19584412 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 101

Conread position: 128-230
Cow position: chr25:18551115-18551222 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 128-315
Cow position: chr25:40439244-40439064 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 15

Conread position: 129-344
Cow position: chr25:11585742-11585539 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 61, 85

Conread position: 129-357
Cow position: chr25:12509592-12509827 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 27, 93

Conread position: 130-244
Cow position: chr25:7012941-7012824 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 130-256
Cow position: chr25:12609553-12609436 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 130-285
Cow position: chr25:17608190-17608038 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 95

Conread position: 130-302
Cow position: chr25:22261071-22261252 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 130-310
Cow position: chr25:7329317-7329120 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 130-315
Cow position: chr25:32667048-32667221 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 12

Conread position: 130-330
Cow position: chr25:24167479-24167661 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 130-344
Cow position: chr25:21951367-21951151 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 38

Conread position: 130-346
Cow position: chr25:35624658-35624860 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 130-350
Cow position: chr25:30624859-30625068 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 11

Conread position: 131-236
Cow position: chr25:22642484-22642378 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 131-250
Cow position: chr25:8223163-8223043 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 19

Conread position: 131-343
Cow position: chr25:23918075-23917862 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 98

Conread position: 131-350
Cow position: chr25:15565779-15565988 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 66

Conread position: 132-250
Cow position: chr25:21894621-21894740 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 132-310
Cow position: chr25:22508092-22508268 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 54

Conread position: 132-344
Cow position: chr25:14216015-14215811 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 76

Conread position: 132-349
Cow position: chr25:34170180-34169961 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 11, 85

Conread position: 132-350
Cow position: chr25:36120741-36120513 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 133-347
Cow position: chr25:12252582-12252792 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 204, 56

Conread position: 134-347
Cow position: chr25:27520537-27520740 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 134-350
Cow position: chr25:7061024-7061241 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 15

Conread position: 135-350
Cow position: chr25:13503660-13503448 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 108

Conread position: 136-350
Cow position: chr25:34241880-34242089 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 137-238
Cow position: chr25:13735579-13735683 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 137-250
Cow position: chr25:7554892-7555006 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 137-313
Cow position: chr25:10497479-10497295 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 137-347
Cow position: chr25:21048992-21049196 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 95

Conread position: 137-350
Cow position: chr25:1823885-1824082 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 75

Conread position: 138-347
Cow position: chr25:19478894-19478693 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 104

Conread position: 139-298
Cow position: chr25:13453860-13454019 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 51

Conread position: 140-283
Cow position: chr25:16000670-16000817 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 133

Conread position: 141-292
Cow position: chr25:36273574-36273425 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 89, 95

Conread position: 143-250
Cow position: chr25:28186251-28186359 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 143-269
Cow position: chr25:6942153-6942278 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 68

Conread position: 143-281
Cow position: chr25:11841498-11841356 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 140

Conread position: 143-345
Cow position: chr25:26052131-26051923 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 143-350
Cow position: chr25:13805226-13805028 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 93

Conread position: 144-245
Cow position: chr25:15440298-15440399 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 65

Conread position: 144-347
Cow position: chr25:36135916-36136122 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 144-350
Cow position: chr25:26161200-26160980 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 14

Conread position: 145-250
Cow position: chr25:36017773-36017669 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 145-331
Cow position: chr25:36019442-36019635 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 145-358
Cow position: chr25:21285098-21284883 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 146-315
Cow position: chr25:22296817-22296976 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 79

Conread position: 147-310
Cow position: chr25:35826067-35826226 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 91

Conread position: 147-343
Cow position: chr25:17144648-17144450 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 27

Conread position: 149-355
Cow position: chr25:12195027-12195219 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 63

Conread position: 158-314
Cow position: chr25:17775215-17775048 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 158-336
Cow position: chr25:7013518-7013699 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 158-336
Cow position: chr25:20461300-20461132 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 58

Conread position: 200-343
Cow position: chr25:14197022-14196884 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 138, 28

Conread position: 213-345
Cow position: chr25:22750856-22750986 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 41

Conread position: 218-331
Cow position: chr25:31343949-31344061 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 219-340
Cow position: chr25:37392130-37392250 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 227-350
Cow position: chr25:31762470-31762593 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 235-350
Cow position: chr25:28187816-28187930 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.