Cow genome map

Conread name: rsin35_c10.y1

Conread position: 87-313
Cow position: chr28:7684411-7684645 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 96

Conread position: 91-226
Cow position: chr28:6563637-6563772 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 44

Conread position: 96-260
Cow position: chr28:3396883-3397045 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 48

Conread position: 96-347
Cow position: chr28:18354057-18354307 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 86

Conread position: 97-228
Cow position: chr28:13356109-13356246 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 5

Conread position: 97-312
Cow position: chr28:14660219-14660000 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 19

Conread position: 110-251
Cow position: chr28:19025698-19025843 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 111-350
Cow position: chr28:9418708-9418944 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 104

Conread position: 112-226
Cow position: chr28:27941547-27941658 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 18

Conread position: 112-313
Cow position: chr28:5724904-5725089 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 114-230
Cow position: chr28:6124027-6124141 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 16

Conread position: 123-332
Cow position: chr28:2960591-2960790 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 20

Conread position: 126-243
Cow position: chr28:24233606-24233724 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 127-281
Cow position: chr28:7964454-7964610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 145

Conread position: 127-331
Cow position: chr28:12964808-12964608 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 113

Conread position: 129-225
Cow position: chr28:8347954-8347857 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 129-313
Cow position: chr28:5774138-5773949 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 129-332
Cow position: chr28:23641021-23641225 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 11

Conread position: 129-343
Cow position: chr28:5152835-5152629 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 209, 50

Conread position: 130-226
Cow position: chr28:10528739-10528836 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 130-226
Cow position: chr28:16200521-16200618 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 130-230
Cow position: chr28:21207156-21207258 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 96

Conread position: 130-264
Cow position: chr28:4536730-4536594 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 130-270
Cow position: chr28:19079580-19079722 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 19

Conread position: 130-336
Cow position: chr28:15043621-15043825 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 130-347
Cow position: chr28:1632426-1632632 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 36

Conread position: 130-347
Cow position: chr28:27161078-27161301 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 31

Conread position: 130-358
Cow position: chr28:16243378-16243599 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 99

Conread position: 131-315
Cow position: chr28:11115327-11115143 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 96

Conread position: 131-335
Cow position: chr28:4077119-4077309 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 106

Conread position: 132-226
Cow position: chr28:5630316-5630221 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 132-226
Cow position: chr28:6301301-6301206 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 132-229
Cow position: chr28:4163363-4163461 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 132-233
Cow position: chr28:21046372-21046474 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 132-233
Cow position: chr28:32203340-32203241 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 17

Conread position: 132-332
Cow position: chr28:25518536-25518725 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 48

Conread position: 132-347
Cow position: chr28:2743333-2743106 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 132-350
Cow position: chr28:3449526-3449325 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 95

Conread position: 132-350
Cow position: chr28:11365289-11365505 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 75

Conread position: 132-350
Cow position: chr28:25487801-25488026 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 43

Conread position: 133-226
Cow position: chr28:3725992-3726087 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 133-350
Cow position: chr28:8408977-8408756 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 91

Conread position: 136-264
Cow position: chr28:32175263-32175134 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 86

Conread position: 136-301
Cow position: chr28:28075560-28075730 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 164

Conread position: 136-315
Cow position: chr28:33052272-33052094 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 39

Conread position: 137-230
Cow position: chr28:17740039-17739943 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 137-344
Cow position: chr28:8259074-8258852 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 42

Conread position: 137-347
Cow position: chr28:5365888-5366098 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 181

Conread position: 137-350
Cow position: chr28:6053496-6053293 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 74

Conread position: 137-358
Cow position: chr28:4873112-4873331 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 106

Conread position: 138-228
Cow position: chr28:5436875-5436966 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 138-259
Cow position: chr28:24727029-24726905 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 138-350
Cow position: chr28:25195926-25195726 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 33

Conread position: 139-296
Cow position: chr28:18836952-18836790 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 140-350
Cow position: chr28:19024659-19024455 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 76

Conread position: 143-334
Cow position: chr28:7532365-7532549 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 98

Conread position: 143-347
Cow position: chr28:32179905-32179718 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 144-259
Cow position: chr28:33301616-33301500 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 33

Conread position: 145-332
Cow position: chr28:29434203-29434388 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 103

Conread position: 146-343
Cow position: chr28:18770290-18770112 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 36

Conread position: 149-315
Cow position: chr28:13232886-13233057 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 149-350
Cow position: chr28:25806797-25806595 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 96

Conread position: 151-343
Cow position: chr28:5867938-5867749 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 23

Conread position: 153-342
Cow position: chr28:16110164-16109967 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 26

Conread position: 155-336
Cow position: chr28:8021875-8022066 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 173

Conread position: 158-310
Cow position: chr28:8099855-8100010 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 106

Conread position: 158-331
Cow position: chr28:3264247-3264084 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 14

Conread position: 159-343
Cow position: chr28:2752286-2752466 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 17

Conread position: 161-336
Cow position: chr28:4051415-4051234 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 203-350
Cow position: chr28:18533737-18533884 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 203-350
Cow position: chr28:31109833-31109982 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 209-350
Cow position: chr28:20313441-20313299 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 211-332
Cow position: chr28:6971184-6971308 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 216-350
Cow position: chr28:2772865-2772733 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 216-350
Cow position: chr28:25677187-25677320 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 26

Conread position: 217-347
Cow position: chr28:12385140-12385268 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 223-353
Cow position: chr28:19222004-19222132 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.