Cow genome map
| Conread name: | rsin35_c10.y1 |
| Conread position: | 81-350 |
| Cow position: | chr3:8813864-8814120 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 88-338 |
| Cow position: | chr3:70319549-70319801 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 96-350 |
| Cow position: | chr3:49383195-49382942 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 101-357 |
| Cow position: | chr3:44594844-44594611 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 104-250 |
| Cow position: | chr3:5346422-5346573 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 105-278 |
| Cow position: | chr3:36831911-36831739 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 105-300 |
| Cow position: | chr3:623964-623772 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 105-347 |
| Cow position: | chr3:35621540-35621297 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 111-342 |
| Cow position: | chr3:76360525-76360745 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 112-340 |
| Cow position: | chr3:43429008-43428776 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 39, 197 |
| Conread position: | 112-350 |
| Cow position: | chr3:10104273-10104034 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 41 |
| Conread position: | 112-350 |
| Cow position: | chr3:17934712-17934945 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 113-250 |
| Cow position: | chr3:36569832-36569968 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 114-353 |
| Cow position: | chr3:16177010-16177256 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 116-341 |
| Cow position: | chr3:15660071-15660291 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 118-350 |
| Cow position: | chr3:43863511-43863736 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 120-350 |
| Cow position: | chr3:2179346-2179112 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 122-219 |
| Cow position: | chr3:40212836-40212935 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 122-340 |
| Cow position: | chr3:82656738-82656952 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 126-350 |
| Cow position: | chr3:81470869-81471103 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 55 |
| Conread position: | 127-224 |
| Cow position: | chr3:4071575-4071674 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 128-226 |
| Cow position: | chr3:60371177-60371078 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 128-313 |
| Cow position: | chr3:82360482-82360298 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 128-325 |
| Cow position: | chr3:50328216-50328396 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 128-336 |
| Cow position: | chr3:38691200-38691399 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 16 |
| Conread position: | 128-350 |
| Cow position: | chr3:30358367-30358591 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 129-236 |
| Cow position: | chr3:18393209-18393319 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 129-250 |
| Cow position: | chr3:27670667-27670541 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 129-250 |
| Cow position: | chr3:49232072-49231953 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 129-277 |
| Cow position: | chr3:24584958-24585102 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 129-298 |
| Cow position: | chr3:10677422-10677583 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 129-336 |
| Cow position: | chr3:80072333-80072136 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 129-350 |
| Cow position: | chr3:45314545-45314339 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 129-350 |
| Cow position: | chr3:78201838-78201603 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 130-225 |
| Cow position: | chr3:18699918-18700014 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 130-228 |
| Cow position: | chr3:22165225-22165324 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 130-230 |
| Cow position: | chr3:48468367-48468265 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 130-291 |
| Cow position: | chr3:36461377-36461217 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 130-310 |
| Cow position: | chr3:35974837-35975022 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 130-312 |
| Cow position: | chr3:59920232-59920058 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 130-331 |
| Cow position: | chr3:53240465-53240265 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 130-336 |
| Cow position: | chr3:75183508-75183315 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 130-343 |
| Cow position: | chr3:35299876-35299667 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 130-343 |
| Cow position: | chr3:59616863-59617066 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 130-344 |
| Cow position: | chr3:14625931-14626151 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 130-350 |
| Cow position: | chr3:23074626-23074409 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 130-350 |
| Cow position: | chr3:47753425-47753219 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 130-350 |
| Cow position: | chr3:64648701-64648485 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 130-350 |
| Cow position: | chr3:67543655-67543876 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 130-356 |
| Cow position: | chr3:13949347-13949570 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 130-357 |
| Cow position: | chr3:29413268-29413046 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 131-239 |
| Cow position: | chr3:50012890-50012781 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 131-250 |
| Cow position: | chr3:75151198-75151317 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 131-250 |
| Cow position: | chr3:75971585-75971706 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 131-336 |
| Cow position: | chr3:3316619-3316808 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 131-336 |
| Cow position: | chr3:45308114-45307914 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 12 |
| Conread position: | 132-220 |
| Cow position: | chr3:15859194-15859283 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-230 |
| Cow position: | chr3:55318710-55318809 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-230 |
| Cow position: | chr3:58497848-58497749 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 132-262 |
| Cow position: | chr3:39969674-39969806 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 132-314 |
| Cow position: | chr3:81371871-81371678 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 132-315 |
| Cow position: | chr3:74127312-74127481 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 132-327 |
| Cow position: | chr3:33460410-33460593 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 132-328 |
| Cow position: | chr3:44243738-44243535 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 132-350 |
| Cow position: | chr3:48810450-48810652 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-350 |
| Cow position: | chr3:57760709-57760491 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 131 |
| Conread position: | 132-359 |
| Cow position: | chr3:67995125-67994902 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 133-262 |
| Cow position: | chr3:26973204-26973335 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 133-315 |
| Cow position: | chr3:55320405-55320581 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 133-336 |
| Cow position: | chr3:76415694-76415896 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 133-347 |
| Cow position: | chr3:4086661-4086868 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 133-350 |
| Cow position: | chr3:78945632-78945849 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 133-359 |
| Cow position: | chr3:42775844-42776059 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 134-226 |
| Cow position: | chr3:75966597-75966689 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 134-288 |
| Cow position: | chr3:21081194-21081345 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 134-350 |
| Cow position: | chr3:53703760-53703970 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 135-315 |
| Cow position: | chr3:621626-621462 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 135-350 |
| Cow position: | chr3:41366515-41366717 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 135-358 |
| Cow position: | chr3:54551315-54551541 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 136-230 |
| Cow position: | chr3:48900145-48900241 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 136-277 |
| Cow position: | chr3:45882083-45881940 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 138 |
| Conread position: | 136-343 |
| Cow position: | chr3:56704127-56704322 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 137-230 |
| Cow position: | chr3:37641509-37641415 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 137-295 |
| Cow position: | chr3:62821816-62821670 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 137-314 |
| Cow position: | chr3:74801861-74802037 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 137-315 |
| Cow position: | chr3:2680719-2680541 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 124 |
| Conread position: | 137-315 |
| Cow position: | chr3:57627663-57627483 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 137-336 |
| Cow position: | chr3:24372138-24371929 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 137-336 |
| Cow position: | chr3:39812243-39812054 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 137-343 |
| Cow position: | chr3:33330017-33329816 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 137-347 |
| Cow position: | chr3:59621426-59621652 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 137-350 |
| Cow position: | chr3:57877784-57877559 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 138-236 |
| Cow position: | chr3:58217621-58217720 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 138-331 |
| Cow position: | chr3:62788973-62789163 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 138-343 |
| Cow position: | chr3:77006678-77006471 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 138-350 |
| Cow position: | chr3:28555939-28556169 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 138-350 |
| Cow position: | chr3:61279120-61278902 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 159 |
| Conread position: | 139-347 |
| Cow position: | chr3:53192095-53192296 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 140-350 |
| Cow position: | chr3:36914250-36914043 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 141-239 |
| Cow position: | chr3:48043795-48043896 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 141-250 |
| Cow position: | chr3:44839077-44839187 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 141-299 |
| Cow position: | chr3:2008457-2008295 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 141-315 |
| Cow position: | chr3:44330229-44330409 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 142-350 |
| Cow position: | chr3:61133844-61133631 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 143-251 |
| Cow position: | chr3:6044848-6044739 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 143-295 |
| Cow position: | chr3:77729876-77729726 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 143-315 |
| Cow position: | chr3:53508819-53508639 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 143-336 |
| Cow position: | chr3:22716100-22716291 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 143-344 |
| Cow position: | chr3:54100536-54100727 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 143-350 |
| Cow position: | chr3:63657672-63657867 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 143-350 |
| Cow position: | chr3:65413089-65413285 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 143-359 |
| Cow position: | chr3:61466993-61467206 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 144-296 |
| Cow position: | chr3:11368834-11368992 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 152 |
| Conread position: | 144-347 |
| Cow position: | chr3:67929994-67930191 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 144-350 |
| Cow position: | chr3:57624684-57624457 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 144-350 |
| Cow position: | chr3:58317767-58317955 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 145-257 |
| Cow position: | chr3:84250649-84250762 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-331 |
| Cow position: | chr3:17447405-17447603 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-336 |
| Cow position: | chr3:1785048-1785238 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 145-344 |
| Cow position: | chr3:25702156-25702343 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 145-344 |
| Cow position: | chr3:28937408-28937606 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 145-350 |
| Cow position: | chr3:9588447-9588650 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 145-350 |
| Cow position: | chr3:28258288-28258088 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 145-350 |
| Cow position: | chr3:30222386-30222183 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 145-364 |
| Cow position: | chr3:6853339-6853553 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 116 |
| Conread position: | 146-315 |
| Cow position: | chr3:48579003-48578832 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 146-331 |
| Cow position: | chr3:13348964-13349140 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 147-334 |
| Cow position: | chr3:26565533-26565716 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 149-256 |
| Cow position: | chr3:44775586-44775478 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 149-315 |
| Cow position: | chr3:21302272-21302437 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 149-363 |
| Cow position: | chr3:53256729-53256506 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 151-336 |
| Cow position: | chr3:57067789-57067615 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 158-347 |
| Cow position: | chr3:5100587-5100776 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 158-348 |
| Cow position: | chr3:53046496-53046668 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 160-343 |
| Cow position: | chr3:84175639-84175824 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 161-330 |
| Cow position: | chr3:395119-395278 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 161-331 |
| Cow position: | chr3:23265162-23265325 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 167-350 |
| Cow position: | chr3:4258054-4258240 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 176 |
| Conread position: | 174-337 |
| Cow position: | chr3:46510321-46510478 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 188-314 |
| Cow position: | chr3:49218148-49218274 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 191-350 |
| Cow position: | chr3:35285198-35285036 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 203-315 |
| Cow position: | chr3:20719171-20719282 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 203-336 |
| Cow position: | chr3:27670555-27670420 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 203-350 |
| Cow position: | chr3:26921055-26920901 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 205-347 |
| Cow position: | chr3:14553013-14552871 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 209-350 |
| Cow position: | chr3:1533972-1534112 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 210-335 |
| Cow position: | chr3:57038190-57038316 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 210-343 |
| Cow position: | chr3:12711781-12711916 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 210-346 |
| Cow position: | chr3:64373024-64373160 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 214-344 |
| Cow position: | chr3:70402024-70401896 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 215-347 |
| Cow position: | chr3:75772923-75772791 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 216-336 |
| Cow position: | chr3:26874719-26874597 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 219-312 |
| Cow position: | chr3:58486259-58486352 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-350 |
| Cow position: | chr3:27108770-27108896 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 229-346 |
| Cow position: | chr3:68624329-68624213 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 237-340 |
| Cow position: | chr3:71423450-71423552 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.