Cow genome map
| Conread name: | rsin35_c10.y1 |
| Conread position: | 91-350 |
| Cow position: | chr6:22215171-22215413 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 93-224 |
| Cow position: | chr6:26408214-26408343 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 95-230 |
| Cow position: | chr6:49686111-49685973 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 95-250 |
| Cow position: | chr6:38419191-38419031 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 97-226 |
| Cow position: | chr6:19682007-19681875 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 102-242 |
| Cow position: | chr6:43345153-43345299 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 103-321 |
| Cow position: | chr6:37199241-37199449 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 107-350 |
| Cow position: | chr6:61128653-61128900 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 112-232 |
| Cow position: | chr6:53711674-53711554 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 112-315 |
| Cow position: | chr6:13326884-13327083 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 113-230 |
| Cow position: | chr6:30688244-30688356 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 113-263 |
| Cow position: | chr6:20431784-20431631 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 113-331 |
| Cow position: | chr6:38020945-38020749 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 113-347 |
| Cow position: | chr6:34569689-34569467 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 116-350 |
| Cow position: | chr6:43606978-43607197 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 121-355 |
| Cow position: | chr6:3448015-3447782 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 123-226 |
| Cow position: | chr6:12711532-12711635 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 125-350 |
| Cow position: | chr6:60740292-60740071 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 126-226 |
| Cow position: | chr6:22849995-22850095 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 126-331 |
| Cow position: | chr6:9750789-9750981 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 126-331 |
| Cow position: | chr6:50882859-50882657 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 128-255 |
| Cow position: | chr6:2617937-2618066 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 129-228 |
| Cow position: | chr6:61544127-61544229 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 129-230 |
| Cow position: | chr6:58636394-58636292 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 129-250 |
| Cow position: | chr6:35964229-35964349 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 129-347 |
| Cow position: | chr6:48469259-48469060 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 130-226 |
| Cow position: | chr6:16738867-16738772 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 130-226 |
| Cow position: | chr6:21004932-21004837 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 130-230 |
| Cow position: | chr6:24110539-24110437 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 130-235 |
| Cow position: | chr6:37603918-37603812 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 130-256 |
| Cow position: | chr6:35097238-35097359 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 130-264 |
| Cow position: | chr6:32458857-32458727 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 130-269 |
| Cow position: | chr6:28620355-28620217 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 130-285 |
| Cow position: | chr6:53753724-53753872 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 130-296 |
| Cow position: | chr6:56950471-56950311 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 130-309 |
| Cow position: | chr6:29291826-29291653 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 130-315 |
| Cow position: | chr6:58227651-58227472 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 130-329 |
| Cow position: | chr6:54840247-54840430 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 130-336 |
| Cow position: | chr6:13040705-13040511 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 130-344 |
| Cow position: | chr6:67215028-67214812 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 130-350 |
| Cow position: | chr6:35993862-35993643 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 130-350 |
| Cow position: | chr6:49607666-49607451 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 130-356 |
| Cow position: | chr6:30895713-30895941 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 131-233 |
| Cow position: | chr6:29775871-29775768 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 131-348 |
| Cow position: | chr6:18454074-18454288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 131-350 |
| Cow position: | chr6:37783679-37783457 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 131-350 |
| Cow position: | chr6:67689343-67689558 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 131-356 |
| Cow position: | chr6:5673651-5673431 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 132-229 |
| Cow position: | chr6:16762377-16762475 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-242 |
| Cow position: | chr6:16411865-16411754 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-256 |
| Cow position: | chr6:56664150-56664024 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 132-285 |
| Cow position: | chr6:23353807-23353658 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 132-335 |
| Cow position: | chr6:18615303-18615515 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 193 |
| Conread position: | 132-350 |
| Cow position: | chr6:38234510-38234289 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 132-350 |
| Cow position: | chr6:60852381-60852585 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 132-359 |
| Cow position: | chr6:7130610-7130832 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 133-342 |
| Cow position: | chr6:17194479-17194276 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 135-226 |
| Cow position: | chr6:23381417-23381509 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 135-230 |
| Cow position: | chr6:26929194-26929290 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 135-265 |
| Cow position: | chr6:16762885-16762754 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 135-348 |
| Cow position: | chr6:34499009-34498798 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 135-350 |
| Cow position: | chr6:29852807-29853008 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 135-350 |
| Cow position: | chr6:36939126-36938924 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 136-239 |
| Cow position: | chr6:416428-416324 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 136-332 |
| Cow position: | chr6:46282744-46282929 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 137-291 |
| Cow position: | chr6:17862683-17862525 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 137-296 |
| Cow position: | chr6:20548785-20548619 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 94 |
| Conread position: | 137-313 |
| Cow position: | chr6:67044474-67044642 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 137-315 |
| Cow position: | chr6:40761494-40761336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 137-332 |
| Cow position: | chr6:9736397-9736582 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 137-336 |
| Cow position: | chr6:21869380-21869578 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 137-347 |
| Cow position: | chr6:35103038-35103268 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 137-347 |
| Cow position: | chr6:46331197-46330981 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 137-347 |
| Cow position: | chr6:67456986-67456778 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 78 |
| Conread position: | 137-350 |
| Cow position: | chr6:6401211-6401008 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 137-350 |
| Cow position: | chr6:18903790-18903995 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 137-355 |
| Cow position: | chr6:57550442-57550225 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 138-350 |
| Cow position: | chr6:20606236-20606017 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 138-350 |
| Cow position: | chr6:35702079-35702288 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 140-326 |
| Cow position: | chr6:34034693-34034506 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 141-336 |
| Cow position: | chr6:8209331-8209534 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 141-340 |
| Cow position: | chr6:30974321-30974109 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 141-350 |
| Cow position: | chr6:47339082-47339297 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 142-311 |
| Cow position: | chr6:35628310-35628141 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 142-331 |
| Cow position: | chr6:35896086-35896277 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 142-342 |
| Cow position: | chr6:51969350-51969140 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 142-343 |
| Cow position: | chr6:139384-139581 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 143-224 |
| Cow position: | chr6:54490505-54490587 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 143-242 |
| Cow position: | chr6:56850258-56850158 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 143-244 |
| Cow position: | chr6:59994268-59994165 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 143-263 |
| Cow position: | chr6:66531527-66531648 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 143-276 |
| Cow position: | chr6:60457522-60457386 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 143-325 |
| Cow position: | chr6:10224456-10224273 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 143-347 |
| Cow position: | chr6:21066607-21066823 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 143-347 |
| Cow position: | chr6:47356067-47355883 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 143-350 |
| Cow position: | chr6:59719052-59718854 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 143-350 |
| Cow position: | chr6:60057397-60057598 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 144-350 |
| Cow position: | chr6:6098009-6098209 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 145-250 |
| Cow position: | chr6:54364490-54364592 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 146-294 |
| Cow position: | chr6:63409058-63409209 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 147-334 |
| Cow position: | chr6:49646060-49645881 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 147-336 |
| Cow position: | chr6:60265931-60266112 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 149-342 |
| Cow position: | chr6:66131554-66131370 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 149-347 |
| Cow position: | chr6:18144436-18144257 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 150-350 |
| Cow position: | chr6:5302168-5302362 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 151-272 |
| Cow position: | chr6:35742414-35742287 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 155-344 |
| Cow position: | chr6:51675164-51674972 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 158-341 |
| Cow position: | chr6:49096202-49096388 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 158-356 |
| Cow position: | chr6:46997538-46997743 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 161-331 |
| Cow position: | chr6:55535491-55535674 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 163-318 |
| Cow position: | chr6:63471487-63471320 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 165-341 |
| Cow position: | chr6:36516204-36516026 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 168-347 |
| Cow position: | chr6:19507947-19508128 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 174-347 |
| Cow position: | chr6:26918907-26918734 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 181-347 |
| Cow position: | chr6:67305291-67305129 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 187-348 |
| Cow position: | chr6:47676236-47676071 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 139 |
| Conread position: | 188-350 |
| Cow position: | chr6:582053-582215 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 194-336 |
| Cow position: | chr6:1684887-1684748 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 203-312 |
| Cow position: | chr6:59109393-59109281 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 203-347 |
| Cow position: | chr6:6343634-6343486 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 203-347 |
| Cow position: | chr6:54990799-54990941 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 207-336 |
| Cow position: | chr6:28900525-28900397 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 209-332 |
| Cow position: | chr6:23465835-23465958 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 209-340 |
| Cow position: | chr6:17706242-17706374 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 210-347 |
| Cow position: | chr6:34512898-34512764 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 210-350 |
| Cow position: | chr6:60451624-60451484 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-347 |
| Cow position: | chr6:7568320-7568184 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-359 |
| Cow position: | chr6:37603759-37603614 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 213-350 |
| Cow position: | chr6:19131623-19131487 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 215-350 |
| Cow position: | chr6:47799484-47799350 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 216-324 |
| Cow position: | chr6:358791-358685 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 218-347 |
| Cow position: | chr6:107236-107365 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-350 |
| Cow position: | chr6:21235223-21235099 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 230-350 |
| Cow position: | chr6:15243012-15242893 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 231-375 |
| Cow position: | chr6:35654377-35654518 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 232-347 |
| Cow position: | chr6:54867691-54867577 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 236-350 |
| Cow position: | chr6:16287890-16288001 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.