Cow genome map
| Conread name: | rsin35_c10.y1 |
| Conread position: | 94-357 |
| Cow position: | chr9:6392413-6392667 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 96-245 |
| Cow position: | chr9:52418362-52418210 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 96-350 |
| Cow position: | chr9:11313762-11313498 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 96-356 |
| Cow position: | chr9:1878691-1878938 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 96-358 |
| Cow position: | chr9:55013560-55013310 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 93, 117 |
| Conread position: | 102-332 |
| Cow position: | chr9:19067561-19067777 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 102-347 |
| Cow position: | chr9:8535643-8535876 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 107-315 |
| Cow position: | chr9:52740132-52739919 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 110-350 |
| Cow position: | chr9:28392251-28392013 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 111-350 |
| Cow position: | chr9:1884344-1884118 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 113-238 |
| Cow position: | chr9:5593898-5594020 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 114-224 |
| Cow position: | chr9:30653257-30653147 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 114-350 |
| Cow position: | chr9:5104613-5104391 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 115-256 |
| Cow position: | chr9:51012002-51011860 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 115-311 |
| Cow position: | chr9:4991339-4991156 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 116-225 |
| Cow position: | chr9:48016787-48016900 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 119-350 |
| Cow position: | chr9:62668019-62668260 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 120-244 |
| Cow position: | chr9:2037239-2037366 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 120-347 |
| Cow position: | chr9:55084529-55084293 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 122-226 |
| Cow position: | chr9:52510922-52511027 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-336 |
| Cow position: | chr9:6293365-6293593 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 122-337 |
| Cow position: | chr9:1937910-1938129 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 95 |
| Conread position: | 124-336 |
| Cow position: | chr9:23840600-23840396 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 125-350 |
| Cow position: | chr9:52000805-52001029 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 126-315 |
| Cow position: | chr9:8562610-8562799 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 126-347 |
| Cow position: | chr9:23541588-23541383 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 126-350 |
| Cow position: | chr9:3847205-3847414 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 127-230 |
| Cow position: | chr9:15806114-15806010 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 127-236 |
| Cow position: | chr9:26388029-26388135 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 127-336 |
| Cow position: | chr9:47955447-47955245 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 127-350 |
| Cow position: | chr9:44467559-44467327 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 128-225 |
| Cow position: | chr9:35932796-35932698 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 128-257 |
| Cow position: | chr9:61274386-61274517 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 128-267 |
| Cow position: | chr9:3341623-3341762 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 128-340 |
| Cow position: | chr9:11304278-11304073 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 128-350 |
| Cow position: | chr9:16300760-16300557 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 129-224 |
| Cow position: | chr9:45141781-45141687 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 129-226 |
| Cow position: | chr9:28747706-28747606 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 129-234 |
| Cow position: | chr9:8629099-8628992 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 129-343 |
| Cow position: | chr9:54677069-54677269 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 129-347 |
| Cow position: | chr9:34014456-34014240 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 129-356 |
| Cow position: | chr9:28295091-28295313 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 129-359 |
| Cow position: | chr9:34811270-34811497 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 130-224 |
| Cow position: | chr9:45170571-45170474 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 130-228 |
| Cow position: | chr9:54482136-54482035 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 130-230 |
| Cow position: | chr9:9091293-9091192 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 130-238 |
| Cow position: | chr9:28378728-28378837 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 130-257 |
| Cow position: | chr9:44526924-44527050 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 130-263 |
| Cow position: | chr9:41701257-41701394 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 130-283 |
| Cow position: | chr9:42986500-42986341 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 130-315 |
| Cow position: | chr9:17855605-17855775 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 130-316 |
| Cow position: | chr9:17360540-17360721 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 130-332 |
| Cow position: | chr9:1323865-1323665 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 130-336 |
| Cow position: | chr9:4268192-4267984 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 130-336 |
| Cow position: | chr9:18342529-18342731 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 130-336 |
| Cow position: | chr9:34264900-34265093 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 130-343 |
| Cow position: | chr9:46664609-46664833 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 130-347 |
| Cow position: | chr9:23632849-23632642 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 130-347 |
| Cow position: | chr9:32858829-32858626 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 130-350 |
| Cow position: | chr9:33681452-33681671 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 130-350 |
| Cow position: | chr9:53413465-53413228 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 131-231 |
| Cow position: | chr9:40005292-40005391 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 131-306 |
| Cow position: | chr9:53553618-53553434 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 131-311 |
| Cow position: | chr9:36826703-36826879 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 131-327 |
| Cow position: | chr9:13141344-13141527 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 131-343 |
| Cow position: | chr9:52513651-52513442 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 131-347 |
| Cow position: | chr9:45454858-45455084 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 131-350 |
| Cow position: | chr9:26477028-26477228 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 102 |
| Conread position: | 131-350 |
| Cow position: | chr9:28686169-28686397 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 132-231 |
| Cow position: | chr9:5068655-5068754 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 132-250 |
| Cow position: | chr9:2927566-2927683 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 132-309 |
| Cow position: | chr9:9779593-9779761 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 132-336 |
| Cow position: | chr9:16137562-16137344 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 133-230 |
| Cow position: | chr9:12786660-12786560 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 133-252 |
| Cow position: | chr9:36849447-36849568 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 133-263 |
| Cow position: | chr9:9421893-9421760 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 133-326 |
| Cow position: | chr9:41588659-41588851 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 133-343 |
| Cow position: | chr9:50202370-50202579 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 134-315 |
| Cow position: | chr9:7362822-7363005 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 134-315 |
| Cow position: | chr9:35534180-35534022 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 134-336 |
| Cow position: | chr9:55354412-55354609 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 135-250 |
| Cow position: | chr9:31638883-31638766 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 135-347 |
| Cow position: | chr9:17518704-17518480 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 135-350 |
| Cow position: | chr9:23403611-23403830 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 137-247 |
| Cow position: | chr9:1733116-1733229 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 137-250 |
| Cow position: | chr9:5219637-5219521 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 137-262 |
| Cow position: | chr9:11319908-11319776 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 137-327 |
| Cow position: | chr9:20329991-20329793 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 137-344 |
| Cow position: | chr9:33597796-33597992 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 137-353 |
| Cow position: | chr9:50540921-50540687 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 53, 188 |
| Conread position: | 138-226 |
| Cow position: | chr9:11447984-11447895 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 138-350 |
| Cow position: | chr9:22374985-22375187 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 138-353 |
| Cow position: | chr9:34910258-34910047 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 139-314 |
| Cow position: | chr9:49225200-49225380 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 140-236 |
| Cow position: | chr9:39577327-39577425 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 140-347 |
| Cow position: | chr9:52840076-52839872 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 141-239 |
| Cow position: | chr9:35540322-35540421 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 141-312 |
| Cow position: | chr9:8022926-8023100 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 141-347 |
| Cow position: | chr9:8976610-8976400 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 141-350 |
| Cow position: | chr9:24243935-24243709 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 141-353 |
| Cow position: | chr9:46189941-46190157 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 141-355 |
| Cow position: | chr9:5763833-5763613 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 142-336 |
| Cow position: | chr9:9686591-9686414 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 142-370 |
| Cow position: | chr9:42998743-42998512 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 178 |
| Conread position: | 143-264 |
| Cow position: | chr9:7951855-7951732 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 143-332 |
| Cow position: | chr9:18226922-18226741 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 143-336 |
| Cow position: | chr9:52807593-52807406 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 143-344 |
| Cow position: | chr9:39681129-39681345 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 143-347 |
| Cow position: | chr9:39957147-39957339 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 143-347 |
| Cow position: | chr9:54716787-54716594 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 143-350 |
| Cow position: | chr9:9461839-9461645 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 143-353 |
| Cow position: | chr9:5073033-5072823 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 144-250 |
| Cow position: | chr9:22696003-22696110 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 144-291 |
| Cow position: | chr9:24784296-24784154 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 144-300 |
| Cow position: | chr9:50074998-50075159 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 144-347 |
| Cow position: | chr9:34484419-34484604 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 145-350 |
| Cow position: | chr9:27345759-27345572 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 147-228 |
| Cow position: | chr9:34399502-34399584 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 147-342 |
| Cow position: | chr9:36843615-36843798 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 148-350 |
| Cow position: | chr9:18217290-18217087 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 149-350 |
| Cow position: | chr9:11427478-11427671 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 153-291 |
| Cow position: | chr9:61966174-61966316 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 153-313 |
| Cow position: | chr9:43281481-43281635 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 158-328 |
| Cow position: | chr9:27698051-27697887 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 158-350 |
| Cow position: | chr9:9753559-9753379 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 159-315 |
| Cow position: | chr9:56772905-56773053 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 159-347 |
| Cow position: | chr9:38846497-38846324 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 159-350 |
| Cow position: | chr9:5407693-5407509 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 159-360 |
| Cow position: | chr9:31345321-31345523 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 163-343 |
| Cow position: | chr9:31270303-31270497 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 165-334 |
| Cow position: | chr9:54086187-54086019 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 175-347 |
| Cow position: | chr9:36849837-36850012 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 175-351 |
| Cow position: | chr9:1520904-1520724 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 176-350 |
| Cow position: | chr9:26310344-26310518 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 180-343 |
| Cow position: | chr9:31814548-31814379 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 182-350 |
| Cow position: | chr9:42446128-42445971 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 203-346 |
| Cow position: | chr9:41716305-41716450 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 203-350 |
| Cow position: | chr9:39758386-39758530 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 203-350 |
| Cow position: | chr9:59386905-59386757 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 209-331 |
| Cow position: | chr9:17310688-17310569 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 210-358 |
| Cow position: | chr9:54528382-54528532 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 211-315 |
| Cow position: | chr9:50667130-50667232 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 211-350 |
| Cow position: | chr9:54051650-54051786 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 216-350 |
| Cow position: | chr9:50081161-50081028 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 220-347 |
| Cow position: | chr9:61981403-61981528 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 221-347 |
| Cow position: | chr9:34135601-34135725 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 225-347 |
| Cow position: | chr9:21888057-21888179 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 230-350 |
| Cow position: | chr9:47214653-47214533 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-350 |
| Cow position: | chr9:43342228-43342343 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.