Cow genome map
| Conread name: | rsin35_c10.y1 |
| Conread position: | 70-347 |
| Cow position: | chrX:11180853-11181149 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 72-350 |
| Cow position: | chrX:16409913-16409646 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 87-226 |
| Cow position: | chrX:27705871-27705733 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 47 |
| Conread position: | 93-347 |
| Cow position: | chrX:11717482-11717736 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 99-229 |
| Cow position: | chrX:17232012-17231880 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 102-226 |
| Cow position: | chrX:42875481-42875355 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 102-347 |
| Cow position: | chrX:23266693-23266462 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 113-347 |
| Cow position: | chrX:20743893-20743651 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 117-343 |
| Cow position: | chrX:41363594-41363809 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 119-340 |
| Cow position: | chrX:4592232-4592448 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 124-350 |
| Cow position: | chrX:31829193-31829417 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 65, 128 |
| Conread position: | 125-232 |
| Cow position: | chrX:22115068-22115175 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 125-350 |
| Cow position: | chrX:42855711-42855502 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 127-225 |
| Cow position: | chrX:11633929-11633829 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 127-230 |
| Cow position: | chrX:35285422-35285316 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 127-336 |
| Cow position: | chrX:7513758-7513546 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 128-228 |
| Cow position: | chrX:4399362-4399262 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 128-363 |
| Cow position: | chrX:40451822-40452053 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 129-226 |
| Cow position: | chrX:3130886-3130789 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 129-226 |
| Cow position: | chrX:27442294-27442392 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 129-236 |
| Cow position: | chrX:35390517-35390625 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 63 |
| Conread position: | 129-350 |
| Cow position: | chrX:37062323-37062541 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 129-350 |
| Cow position: | chrX:37129540-37129313 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 130-226 |
| Cow position: | chrX:4632613-4632708 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 130-238 |
| Cow position: | chrX:27431680-27431787 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 130-242 |
| Cow position: | chrX:34193836-34193950 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 130-257 |
| Cow position: | chrX:25344287-25344415 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 130-266 |
| Cow position: | chrX:41096794-41096655 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 130-303 |
| Cow position: | chrX:47657634-47657460 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 130-315 |
| Cow position: | chrX:42148110-42147919 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 130-331 |
| Cow position: | chrX:4444672-4444484 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 106 |
| Conread position: | 130-331 |
| Cow position: | chrX:16348311-16348508 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 130-336 |
| Cow position: | chrX:31312299-31312087 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 130-346 |
| Cow position: | chrX:22387001-22387202 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 130-347 |
| Cow position: | chrX:47349778-47349563 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 130-350 |
| Cow position: | chrX:11084796-11085019 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 180 |
| Conread position: | 130-350 |
| Cow position: | chrX:23562116-23561901 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 130-360 |
| Cow position: | chrX:2742061-2742310 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 131-230 |
| Cow position: | chrX:11670930-11670829 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 131-250 |
| Cow position: | chrX:23265189-23265309 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 131-347 |
| Cow position: | chrX:40480608-40480826 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 132-226 |
| Cow position: | chrX:17498564-17498469 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-230 |
| Cow position: | chrX:8759865-8759765 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 132-230 |
| Cow position: | chrX:20339654-20339751 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 132-232 |
| Cow position: | chrX:24170484-24170585 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-245 |
| Cow position: | chrX:11195025-11194906 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 132-250 |
| Cow position: | chrX:35848990-35848868 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 132-250 |
| Cow position: | chrX:38226524-38226643 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-250 |
| Cow position: | chrX:42482548-42482668 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-256 |
| Cow position: | chrX:48043982-48044108 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-332 |
| Cow position: | chrX:21910772-21910965 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 132-336 |
| Cow position: | chrX:878109-878322 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-336 |
| Cow position: | chrX:41940089-41939881 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 132-342 |
| Cow position: | chrX:5872573-5872368 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 132-343 |
| Cow position: | chrX:25282772-25282988 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 133-226 |
| Cow position: | chrX:6407784-6407690 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 133-250 |
| Cow position: | chrX:15545411-15545529 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 133-347 |
| Cow position: | chrX:27393778-27393979 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 134-315 |
| Cow position: | chrX:42164651-42164473 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 135-301 |
| Cow position: | chrX:29488264-29488104 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 136-250 |
| Cow position: | chrX:27185827-27185711 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 136-289 |
| Cow position: | chrX:13636056-13635905 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 136-336 |
| Cow position: | chrX:38853448-38853256 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 137-226 |
| Cow position: | chrX:8642281-8642191 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 137-233 |
| Cow position: | chrX:24546989-24547084 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 137-273 |
| Cow position: | chrX:32796972-32797109 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 137-301 |
| Cow position: | chrX:27689347-27689181 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 137-327 |
| Cow position: | chrX:3405042-3405227 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 137-336 |
| Cow position: | chrX:6267905-6267720 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 137-336 |
| Cow position: | chrX:40531790-40531985 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 137-340 |
| Cow position: | chrX:43011907-43012099 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 137-343 |
| Cow position: | chrX:37489965-37489769 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 137-344 |
| Cow position: | chrX:19096958-19097168 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 53, 184 |
| Conread position: | 137-347 |
| Cow position: | chrX:32821276-32821074 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 137-350 |
| Cow position: | chrX:7362558-7362785 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 137-350 |
| Cow position: | chrX:9416421-9416640 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 138-226 |
| Cow position: | chrX:40680850-40680761 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 138-250 |
| Cow position: | chrX:33151690-33151803 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 138-252 |
| Cow position: | chrX:26881327-26881441 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 138-256 |
| Cow position: | chrX:33865062-33865183 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 138-342 |
| Cow position: | chrX:12255071-12255267 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 138-357 |
| Cow position: | chrX:7695998-7695786 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 138-359 |
| Cow position: | chrX:4036918-4037138 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 139-228 |
| Cow position: | chrX:8925914-8925824 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 139-230 |
| Cow position: | chrX:4559968-4559876 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 139-248 |
| Cow position: | chrX:7910840-7910946 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 139-328 |
| Cow position: | chrX:2206356-2206533 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 139-350 |
| Cow position: | chrX:25412153-25411951 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 140-347 |
| Cow position: | chrX:40649135-40648941 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 141-350 |
| Cow position: | chrX:15820837-15820639 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 141-350 |
| Cow position: | chrX:29733360-29733548 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 141-350 |
| Cow position: | chrX:41270735-41270942 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 142-255 |
| Cow position: | chrX:12250046-12249933 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 142-328 |
| Cow position: | chrX:13382573-13382391 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 142-347 |
| Cow position: | chrX:29680015-29680214 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 143-248 |
| Cow position: | chrX:11501126-11501021 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 143-250 |
| Cow position: | chrX:36069467-36069361 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 143-252 |
| Cow position: | chrX:14887814-14887704 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 143-329 |
| Cow position: | chrX:23182737-23182918 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 143-331 |
| Cow position: | chrX:23498433-23498617 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 143-336 |
| Cow position: | chrX:6599544-6599724 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 143-340 |
| Cow position: | chrX:1385425-1385221 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 143-341 |
| Cow position: | chrX:23485760-23485573 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 143-343 |
| Cow position: | chrX:23562897-23562682 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 143-347 |
| Cow position: | chrX:43014430-43014626 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 143-350 |
| Cow position: | chrX:31373780-31373582 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 144-251 |
| Cow position: | chrX:33740687-33740577 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 144-294 |
| Cow position: | chrX:7576875-7576730 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 144-303 |
| Cow position: | chrX:28846355-28846199 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 144-336 |
| Cow position: | chrX:40557429-40557621 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 144-342 |
| Cow position: | chrX:23513773-23513965 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 145-249 |
| Cow position: | chrX:11454749-11454855 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 145-300 |
| Cow position: | chrX:42883471-42883322 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 145-336 |
| Cow position: | chrX:17726243-17726033 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-350 |
| Cow position: | chrX:6222863-6223084 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 145-350 |
| Cow position: | chrX:41990895-41991090 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 146-304 |
| Cow position: | chrX:32975864-32976022 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 146-314 |
| Cow position: | chrX:13784985-13785142 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 149-245 |
| Cow position: | chrX:29328039-29327942 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 149-306 |
| Cow position: | chrX:27682921-27682753 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 149-336 |
| Cow position: | chrX:616015-616201 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 149-347 |
| Cow position: | chrX:27667664-27667472 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 149-347 |
| Cow position: | chrX:31626741-31626930 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 149-350 |
| Cow position: | chrX:4612650-4612838 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 149-350 |
| Cow position: | chrX:23574912-23574699 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 149-362 |
| Cow position: | chrX:36039639-36039432 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 151-313 |
| Cow position: | chrX:27296275-27296438 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 151-320 |
| Cow position: | chrX:47365076-47364914 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 158-315 |
| Cow position: | chrX:9855906-9855746 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 158-336 |
| Cow position: | chrX:40269723-40269549 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 159-331 |
| Cow position: | chrX:36848343-36848515 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 159-350 |
| Cow position: | chrX:6850439-6850254 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 160-310 |
| Cow position: | chrX:8900232-8900086 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 160-350 |
| Cow position: | chrX:6690030-6690216 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 161-347 |
| Cow position: | chrX:18694710-18694884 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 164-350 |
| Cow position: | chrX:31294360-31294528 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 165-350 |
| Cow position: | chrX:7278138-7277955 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 174-313 |
| Cow position: | chrX:753369-753237 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 203-343 |
| Cow position: | chrX:33151796-33151933 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 203-347 |
| Cow position: | chrX:28098516-28098373 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 204-350 |
| Cow position: | chrX:38549635-38549491 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 206-347 |
| Cow position: | chrX:23188596-23188737 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 210-335 |
| Cow position: | chrX:27189352-27189230 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 210-350 |
| Cow position: | chrX:43730039-43730180 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 210-358 |
| Cow position: | chrX:16481387-16481530 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 213-336 |
| Cow position: | chrX:8797429-8797307 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 213-336 |
| Cow position: | chrX:33640155-33640033 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 215-316 |
| Cow position: | chrX:42482657-42482757 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 215-347 |
| Cow position: | chrX:23860815-23860947 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 217-358 |
| Cow position: | chrX:7107679-7107537 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 218-332 |
| Cow position: | chrX:32795933-32796046 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 220-340 |
| Cow position: | chrX:4043694-4043814 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 224-350 |
| Cow position: | chrX:28878006-28878130 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 230-332 |
| Cow position: | chrX:6480433-6480534 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 230-332 |
| Cow position: | chrX:11589204-11589305 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 230-340 |
| Cow position: | chrX:1122384-1122493 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 231-376 |
| Cow position: | chrX:27415418-27415567 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 232-347 |
| Cow position: | chrX:31252568-31252455 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 235-347 |
| Cow position: | chrX:17888265-17888376 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 235-347 |
| Cow position: | chrX:27074890-27075004 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 237-347 |
| Cow position: | chrX:11653926-11653817 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 238-344 |
| Cow position: | chrX:32747887-32747782 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 22 |
Show alignments to all cow chromosomes.