Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 10-119 |
| Cow position: | chr10:15912779-15912670 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 101-295 |
| Cow position: | chr10:19704365-19704561 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 110-297 |
| Cow position: | chr10:33240544-33240730 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 113-281 |
| Cow position: | chr10:52244512-52244683 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 148 |
| Conread position: | 113-294 |
| Cow position: | chr10:27538634-27538451 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 114-247 |
| Cow position: | chr10:49586332-49586469 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 114-255 |
| Cow position: | chr10:19601702-19601843 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-260 |
| Cow position: | chr10:52069841-52069989 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 114-275 |
| Cow position: | chr10:22479593-22479751 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 114-281 |
| Cow position: | chr10:15391623-15391456 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 114-283 |
| Cow position: | chr10:10124477-10124307 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 133 |
| Conread position: | 114-283 |
| Cow position: | chr10:39081527-39081361 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 114-283 |
| Cow position: | chr10:45606300-45606463 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 114-289 |
| Cow position: | chr10:29689199-29689375 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 114-293 |
| Cow position: | chr10:25479225-25479058 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 114-296 |
| Cow position: | chr10:49624901-49624717 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 114-297 |
| Cow position: | chr10:48255090-48255276 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 114-305 |
| Cow position: | chr10:38449179-38449370 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 142 |
| Conread position: | 114-307 |
| Cow position: | chr10:6011918-6012113 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 114-308 |
| Cow position: | chr10:908085-907897 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 137, 63 |
| Conread position: | 119-288 |
| Cow position: | chr10:36498339-36498172 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 137 |
| Conread position: | 120-240 |
| Cow position: | chr10:9341608-9341731 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 120-240 |
| Cow position: | chr10:35716964-35717084 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 120-252 |
| Cow position: | chr10:61426607-61426742 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 120-281 |
| Cow position: | chr10:62325738-62325581 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 120 |
| Conread position: | 120-282 |
| Cow position: | chr10:6921846-6921688 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 120-283 |
| Cow position: | chr10:68251940-68251780 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 120-285 |
| Cow position: | chr10:11404012-11404175 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 120-288 |
| Cow position: | chr10:24786236-24786066 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 120-288 |
| Cow position: | chr10:41984759-41984929 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 120-288 |
| Cow position: | chr10:56705458-56705627 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 120-290 |
| Cow position: | chr10:3115610-3115436 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 120-293 |
| Cow position: | chr10:62517010-62516835 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 138 |
| Conread position: | 120-298 |
| Cow position: | chr10:23948791-23948972 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 120-307 |
| Cow position: | chr10:11530472-11530295 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 121-245 |
| Cow position: | chr10:52889108-52889235 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 121-251 |
| Cow position: | chr10:1041327-1041195 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 121-283 |
| Cow position: | chr10:11032373-11032528 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 121-295 |
| Cow position: | chr10:19126786-19126956 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 121-296 |
| Cow position: | chr10:6490637-6490816 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 122-262 |
| Cow position: | chr10:2266921-2267062 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 122-280 |
| Cow position: | chr10:30741505-30741346 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 122-283 |
| Cow position: | chr10:65071992-65072153 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 122-294 |
| Cow position: | chr10:6568355-6568189 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 122-308 |
| Cow position: | chr10:16649803-16649988 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 123-237 |
| Cow position: | chr10:30753298-30753182 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 123-283 |
| Cow position: | chr10:20109825-20109978 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 123-283 |
| Cow position: | chr10:31250614-31250770 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 123-283 |
| Cow position: | chr10:34167999-34167850 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 123-284 |
| Cow position: | chr10:38429425-38429583 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 123-285 |
| Cow position: | chr10:8412926-8413090 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 123-288 |
| Cow position: | chr10:15873952-15874116 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 123-288 |
| Cow position: | chr10:23404325-23404161 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 123-288 |
| Cow position: | chr10:58746124-58746293 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 123-293 |
| Cow position: | chr10:9794536-9794707 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 123-308 |
| Cow position: | chr10:8760039-8760214 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 124-288 |
| Cow position: | chr10:58608226-58608062 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 125-242 |
| Cow position: | chr10:20952255-20952138 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-288 |
| Cow position: | chr10:31368610-31368774 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 129-240 |
| Cow position: | chr10:68566299-68566184 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 132-281 |
| Cow position: | chr10:1478317-1478468 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 133-283 |
| Cow position: | chr10:53762006-53762151 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 135-240 |
| Cow position: | chr10:45299924-45299816 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 135-270 |
| Cow position: | chr10:65130372-65130507 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 136-283 |
| Cow position: | chr10:66753351-66753202 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 125 |
| Conread position: | 137-281 |
| Cow position: | chr10:2407019-2407166 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 138-294 |
| Cow position: | chr10:30449953-30450111 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 120 |
| Conread position: | 141-306 |
| Cow position: | chr10:46067213-46067046 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 144-271 |
| Cow position: | chr10:1070041-1070170 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 147-308 |
| Cow position: | chr10:8077060-8077224 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 148-275 |
| Cow position: | chr10:21424579-21424704 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 168-293 |
| Cow position: | chr10:25293867-25293740 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 93 |
Show alignments to all cow chromosomes.