Cow genome map

Conread name: rski0110_o3.y1

Conread position: 101-275
Cow position: chr11:24216290-24216118 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 31

Conread position: 101-308
Cow position: chr11:1668819-1668605 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 175, 84

Conread position: 109-293
Cow position: chr11:31894417-31894236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 133

Conread position: 111-266
Cow position: chr11:373001-373161 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 113-283
Cow position: chr11:14308776-14308608 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 30

Conread position: 114-242
Cow position: chr11:11460612-11460484 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 114-245
Cow position: chr11:76007519-76007385 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 113

Conread position: 114-264
Cow position: chr11:13306683-13306840 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 114-271
Cow position: chr11:34642093-34642248 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 122

Conread position: 114-272
Cow position: chr11:19502108-19501949 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 96

Conread position: 114-272
Cow position: chr11:43646270-43646432 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 146

Conread position: 114-274
Cow position: chr11:9056097-9055939 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 114-274
Cow position: chr11:47565797-47565960 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 148

Conread position: 114-281
Cow position: chr11:45890099-45889934 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 128

Conread position: 114-282
Cow position: chr11:65958561-65958730 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 146

Conread position: 114-283
Cow position: chr11:9874453-9874289 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 98

Conread position: 114-283
Cow position: chr11:50937598-50937776 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 155

Conread position: 114-284
Cow position: chr11:37372451-37372277 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 145

Conread position: 114-285
Cow position: chr11:26468286-26468115 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 42

Conread position: 114-287
Cow position: chr11:696208-696381 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 144

Conread position: 114-288
Cow position: chr11:5648879-5648710 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 114-288
Cow position: chr11:17151811-17151640 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 122

Conread position: 114-288
Cow position: chr11:19259372-19259549 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 148

Conread position: 114-293
Cow position: chr11:7001789-7001971 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 126

Conread position: 114-293
Cow position: chr11:16232794-16232978 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 150

Conread position: 114-293
Cow position: chr11:32438812-32438992 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 61

Conread position: 114-293
Cow position: chr11:50951695-50951516 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 145

Conread position: 114-297
Cow position: chr11:7684097-7683921 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 93

Conread position: 114-297
Cow position: chr11:41272278-41272094 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 154

Conread position: 114-297
Cow position: chr11:54244813-54244625 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 96

Conread position: 114-297
Cow position: chr11:62573868-62574054 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 49

Conread position: 114-308
Cow position: chr11:63156784-63156980 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 32

Conread position: 114-308
Cow position: chr11:63508551-63508355 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 144

Conread position: 120-237
Cow position: chr11:54058125-54058005 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 120-259
Cow position: chr11:44609694-44609557 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 93

Conread position: 120-260
Cow position: chr11:6729802-6729658 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 120-273
Cow position: chr11:50953429-50953584 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 138

Conread position: 120-275
Cow position: chr11:62215058-62215216 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 142

Conread position: 120-275
Cow position: chr11:84795615-84795772 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 141

Conread position: 120-281
Cow position: chr11:53452215-53452374 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 122

Conread position: 120-283
Cow position: chr11:27722527-27722361 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 142

Conread position: 120-285
Cow position: chr11:40275467-40275634 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 67, 137

Conread position: 120-285
Cow position: chr11:40278959-40279126 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 67, 137

Conread position: 120-288
Cow position: chr11:8828498-8828664 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 68, 122

Conread position: 120-288
Cow position: chr11:34945937-34946107 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 136

Conread position: 120-288
Cow position: chr11:47193648-47193479 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 112

Conread position: 120-293
Cow position: chr11:11785467-11785291 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 142

Conread position: 120-303
Cow position: chr11:2393954-2394135 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 95

Conread position: 120-307
Cow position: chr11:31422865-31422672 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 141

Conread position: 120-307
Cow position: chr11:69402117-69402304 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 165, 138

Conread position: 120-308
Cow position: chr11:14941476-14941665 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 117

Conread position: 120-308
Cow position: chr11:23047630-23047817 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 122

Conread position: 121-232
Cow position: chr11:13039047-13039157 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 121-283
Cow position: chr11:12949815-12949974 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 43

Conread position: 121-288
Cow position: chr11:27681634-27681465 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 65, 137

Conread position: 121-292
Cow position: chr11:11752383-11752557 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 138

Conread position: 121-297
Cow position: chr11:65988357-65988184 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 100

Conread position: 121-308
Cow position: chr11:29802458-29802648 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 48

Conread position: 122-253
Cow position: chr11:77008173-77008040 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 121

Conread position: 122-271
Cow position: chr11:13121883-13122030 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 111

Conread position: 122-273
Cow position: chr11:20491699-20491551 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 22

Conread position: 122-273
Cow position: chr11:52832589-52832742 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 139

Conread position: 122-300
Cow position: chr11:36701882-36701705 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 30

Conread position: 123-273
Cow position: chr11:61427724-61427573 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 83

Conread position: 123-283
Cow position: chr11:17452364-17452206 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 119

Conread position: 123-283
Cow position: chr11:67236531-67236371 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 116

Conread position: 123-307
Cow position: chr11:66401821-66401631 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 162

Conread position: 123-308
Cow position: chr11:38667694-38667887 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 145

Conread position: 124-259
Cow position: chr11:53141584-53141718 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 107

Conread position: 124-281
Cow position: chr11:60137820-60137666 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 86

Conread position: 125-284
Cow position: chr11:39809117-39808961 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 28

Conread position: 125-297
Cow position: chr11:24625969-24625799 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 125-297
Cow position: chr11:51745476-51745309 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 114

Conread position: 129-283
Cow position: chr11:38845140-38845293 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 130-288
Cow position: chr11:2484394-2484550 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 104

Conread position: 133-283
Cow position: chr11:81518055-81518203 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 109

Conread position: 133-293
Cow position: chr11:72082825-72082667 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 109

Conread position: 136-297
Cow position: chr11:42519851-42519693 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 98

Conread position: 137-277
Cow position: chr11:8232333-8232474 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 31

Conread position: 156-287
Cow position: chr11:25861509-25861640 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 69

Conread position: 158-297
Cow position: chr11:9083573-9083431 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 100

Show alignments to all cow chromosomes.