Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 112-262 |
| Cow position: | chr12:27038621-27038773 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 120 |
| Conread position: | 112-285 |
| Cow position: | chr12:44057638-44057465 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 113-302 |
| Cow position: | chr12:7645690-7645870 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 114-240 |
| Cow position: | chr12:28017165-28017036 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 114-281 |
| Cow position: | chr12:34242206-34242375 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 72, 147 |
| Conread position: | 114-283 |
| Cow position: | chr12:18094009-18093842 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 114-283 |
| Cow position: | chr12:18966637-18966805 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-283 |
| Cow position: | chr12:48425829-48425663 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 127 |
| Conread position: | 114-284 |
| Cow position: | chr12:42918583-42918423 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 114-288 |
| Cow position: | chr12:7996530-7996357 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 114-288 |
| Cow position: | chr12:25619259-25619428 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 52 |
| Conread position: | 114-293 |
| Cow position: | chr12:5658627-5658808 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 99 |
| Conread position: | 114-293 |
| Cow position: | chr12:31528736-31528917 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 74, 147 |
| Conread position: | 114-294 |
| Cow position: | chr12:31258126-31257956 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 171, 36 |
| Conread position: | 119-294 |
| Cow position: | chr12:27055720-27055541 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 120-240 |
| Cow position: | chr12:14855924-14855801 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 120-268 |
| Cow position: | chr12:25933796-25933648 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 120-273 |
| Cow position: | chr12:32413629-32413472 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 120-282 |
| Cow position: | chr12:41642545-41642382 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 138 |
| Conread position: | 120-283 |
| Cow position: | chr12:5497713-5497873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 120-289 |
| Cow position: | chr12:25312262-25312427 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 120-301 |
| Cow position: | chr12:45541821-45541641 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 122 |
| Conread position: | 121-281 |
| Cow position: | chr12:17262964-17262806 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 121 |
| Conread position: | 122-297 |
| Cow position: | chr12:13657632-13657809 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 123-275 |
| Cow position: | chr12:14325162-14325310 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 123-283 |
| Cow position: | chr12:18768960-18769122 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 123-288 |
| Cow position: | chr12:1883423-1883585 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 123-308 |
| Cow position: | chr12:34849747-34849929 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 123-308 |
| Cow position: | chr12:34852384-34852566 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 125-290 |
| Cow position: | chr12:4583054-4582886 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 136 |
| Conread position: | 125-308 |
| Cow position: | chr12:21829181-21828995 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 128-288 |
| Cow position: | chr12:30596574-30596410 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 133-269 |
| Cow position: | chr12:10846553-10846685 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 133-288 |
| Cow position: | chr12:30065035-30064883 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 135-288 |
| Cow position: | chr12:31198866-31198710 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 143-305 |
| Cow position: | chr12:47063787-47063946 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 71 |
Show alignments to all cow chromosomes.