Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 91-288 |
| Cow position: | chr16:26155961-26156154 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 149 |
| Conread position: | 113-259 |
| Cow position: | chr16:56283104-56282957 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 113-283 |
| Cow position: | chr16:44523-44358 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 113-283 |
| Cow position: | chr16:15320325-15320491 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 114-253 |
| Cow position: | chr16:50114346-50114202 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 114-264 |
| Cow position: | chr16:9407720-9407868 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-266 |
| Cow position: | chr16:25464208-25464064 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 114-277 |
| Cow position: | chr16:11085225-11085388 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 114-283 |
| Cow position: | chr16:689861-689691 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 114-283 |
| Cow position: | chr16:11662191-11662024 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-283 |
| Cow position: | chr16:15806110-15805942 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 114-283 |
| Cow position: | chr16:18557105-18557277 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 114-283 |
| Cow position: | chr16:47909184-47909356 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 148 |
| Conread position: | 114-286 |
| Cow position: | chr16:31490473-31490304 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 127 |
| Conread position: | 114-288 |
| Cow position: | chr16:15938373-15938546 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 102, 69 |
| Conread position: | 114-288 |
| Cow position: | chr16:31419605-31419429 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 114-288 |
| Cow position: | chr16:53267881-53267708 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 114-293 |
| Cow position: | chr16:228339-228518 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 114-307 |
| Cow position: | chr16:2618829-2619020 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 114-308 |
| Cow position: | chr16:8704414-8704226 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 158, 66 |
| Conread position: | 114-308 |
| Cow position: | chr16:12072793-12072587 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 114-308 |
| Cow position: | chr16:16055903-16056103 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 116-296 |
| Cow position: | chr16:5511964-5511780 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 146 |
| Conread position: | 120-229 |
| Cow position: | chr16:4708749-4708861 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 120-235 |
| Cow position: | chr16:52565571-52565454 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 120-251 |
| Cow position: | chr16:47116222-47116088 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 120-259 |
| Cow position: | chr16:23978281-23978423 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 120-281 |
| Cow position: | chr16:42312536-42312375 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 120-288 |
| Cow position: | chr16:19002939-19003105 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 120-294 |
| Cow position: | chr16:28827025-28827201 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 139 |
| Conread position: | 121-282 |
| Cow position: | chr16:16946386-16946549 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 122-268 |
| Cow position: | chr16:16546223-16546075 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 131 |
| Conread position: | 122-283 |
| Cow position: | chr16:10303600-10303758 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 122-308 |
| Cow position: | chr16:28266882-28267066 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 123-294 |
| Cow position: | chr16:38621105-38620931 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 123-308 |
| Cow position: | chr16:20260623-20260438 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 128-283 |
| Cow position: | chr16:44580927-44581085 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 134 |
| Conread position: | 132-284 |
| Cow position: | chr16:44898615-44898762 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 134-288 |
| Cow position: | chr16:5333456-5333604 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 135-308 |
| Cow position: | chr16:19977101-19976922 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 136-259 |
| Cow position: | chr16:53420475-53420355 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 137-283 |
| Cow position: | chr16:18427319-18427175 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 138-283 |
| Cow position: | chr16:52222197-52222338 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 148-274 |
| Cow position: | chr16:56104789-56104915 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 19 |
Show alignments to all cow chromosomes.