Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 101-308 |
| Cow position: | chr18:35767306-35767100 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 104-308 |
| Cow position: | chr18:21706049-21706266 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 113-293 |
| Cow position: | chr18:26373046-26372864 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 113-308 |
| Cow position: | chr18:33842959-33843163 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 114-230 |
| Cow position: | chr18:28794961-28794843 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 114-247 |
| Cow position: | chr18:4378890-4378756 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 114-283 |
| Cow position: | chr18:51298604-51298436 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 114-287 |
| Cow position: | chr18:43712171-43711997 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 114-287 |
| Cow position: | chr18:50700809-50700636 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 144 |
| Conread position: | 114-288 |
| Cow position: | chr18:45961148-45961323 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 114-292 |
| Cow position: | chr18:22411487-22411666 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 114-293 |
| Cow position: | chr18:42061200-42061020 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 114-293 |
| Cow position: | chr18:43113824-43113999 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 114-294 |
| Cow position: | chr18:19364057-19363882 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 114-300 |
| Cow position: | chr18:44493361-44493547 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 74, 138 |
| Conread position: | 114-308 |
| Cow position: | chr18:51537563-51537748 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 117-240 |
| Cow position: | chr18:39210890-39211018 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 119-293 |
| Cow position: | chr18:25970519-25970688 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 47 |
| Conread position: | 120-252 |
| Cow position: | chr18:21094986-21095121 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 120-260 |
| Cow position: | chr18:35608044-35607902 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 122 |
| Conread position: | 120-275 |
| Cow position: | chr18:48458793-48458636 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 120-288 |
| Cow position: | chr18:24855725-24855895 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 120-292 |
| Cow position: | chr18:248696-248869 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 142 |
| Conread position: | 120-293 |
| Cow position: | chr18:16726767-16726594 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 120-298 |
| Cow position: | chr18:44400565-44400388 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 122 |
| Conread position: | 121-285 |
| Cow position: | chr18:38126332-38126497 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 121-297 |
| Cow position: | chr18:20126987-20127166 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 121-306 |
| Cow position: | chr18:10687476-10687665 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 122-280 |
| Cow position: | chr18:15831481-15831636 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 122-283 |
| Cow position: | chr18:15689403-15689240 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 122-283 |
| Cow position: | chr18:30566443-30566601 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 122-283 |
| Cow position: | chr18:32909164-32909003 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-288 |
| Cow position: | chr18:43554960-43555126 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 123-240 |
| Cow position: | chr18:7409186-7409306 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 124-308 |
| Cow position: | chr18:51412459-51412283 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 125-272 |
| Cow position: | chr18:5756092-5755946 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 125-283 |
| Cow position: | chr18:55696910-55697066 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 128-260 |
| Cow position: | chr18:24221681-24221550 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 129-259 |
| Cow position: | chr18:33853356-33853229 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 129-288 |
| Cow position: | chr18:32773988-32773827 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 131-283 |
| Cow position: | chr18:34324847-34324997 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 108 |
| Conread position: | 133-308 |
| Cow position: | chr18:33275395-33275221 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 138-294 |
| Cow position: | chr18:25002789-25002946 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 122 |
Show alignments to all cow chromosomes.