Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 101-288 |
| Cow position: | chr2:73027613-73027425 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 160 |
| Conread position: | 101-291 |
| Cow position: | chr2:58685553-58685365 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 104-242 |
| Cow position: | chr2:77843422-77843564 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 104-271 |
| Cow position: | chr2:304215-304385 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 112-283 |
| Cow position: | chr2:7720753-7720922 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 130 |
| Conread position: | 113-308 |
| Cow position: | chr2:42925450-42925244 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 114-240 |
| Cow position: | chr2:45435255-45435127 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 114-258 |
| Cow position: | chr2:51041456-51041604 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 114-259 |
| Cow position: | chr2:38913829-38913680 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 114-275 |
| Cow position: | chr2:51028112-51027952 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 100 |
| Conread position: | 114-280 |
| Cow position: | chr2:29382520-29382689 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 114-281 |
| Cow position: | chr2:39855941-39855781 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 114-283 |
| Cow position: | chr2:2937716-2937554 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 114-283 |
| Cow position: | chr2:13604628-13604456 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 148 |
| Conread position: | 114-283 |
| Cow position: | chr2:42774433-42774269 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 114-285 |
| Cow position: | chr2:18061472-18061643 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 114-288 |
| Cow position: | chr2:10356520-10356690 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 114-288 |
| Cow position: | chr2:26042081-26042258 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 114-288 |
| Cow position: | chr2:70664176-70663999 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 114-288 |
| Cow position: | chr2:73999880-73999707 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 114-297 |
| Cow position: | chr2:82054686-82054867 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 114-301 |
| Cow position: | chr2:72584079-72583896 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-302 |
| Cow position: | chr2:62384524-62384715 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 114-307 |
| Cow position: | chr2:8245677-8245484 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 150 |
| Conread position: | 114-308 |
| Cow position: | chr2:67758996-67759184 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 115-252 |
| Cow position: | chr2:56884577-56884438 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 115-275 |
| Cow position: | chr2:68981852-68982015 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 156 |
| Conread position: | 115-294 |
| Cow position: | chr2:36294982-36294805 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 119-283 |
| Cow position: | chr2:793799-793634 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 119-294 |
| Cow position: | chr2:425966-425790 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 120-274 |
| Cow position: | chr2:14099801-14099649 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 120-280 |
| Cow position: | chr2:49480442-49480599 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 120-281 |
| Cow position: | chr2:86199538-86199378 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 120-282 |
| Cow position: | chr2:61442748-61442588 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 120-283 |
| Cow position: | chr2:7498727-7498566 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 120-283 |
| Cow position: | chr2:24624669-24624513 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 5 |
| Conread position: | 120-288 |
| Cow position: | chr2:33659549-33659720 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 120-288 |
| Cow position: | chr2:46783668-46783498 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 120-288 |
| Cow position: | chr2:64196842-64197009 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 120-294 |
| Cow position: | chr2:8601534-8601701 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 121-272 |
| Cow position: | chr2:53000659-53000512 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 96 |
| Conread position: | 121-277 |
| Cow position: | chr2:33596506-33596664 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 121-285 |
| Cow position: | chr2:41765639-41765476 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 134 |
| Conread position: | 121-288 |
| Cow position: | chr2:4010252-4010092 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 121-294 |
| Cow position: | chr2:82311047-82311222 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 122-272 |
| Cow position: | chr2:56269462-56269616 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 122-275 |
| Cow position: | chr2:48748575-48748731 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 123-270 |
| Cow position: | chr2:67485395-67485247 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 123-275 |
| Cow position: | chr2:25084837-25084683 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 123-297 |
| Cow position: | chr2:1651548-1651380 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 124-283 |
| Cow position: | chr2:13466181-13466024 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 124-285 |
| Cow position: | chr2:77981999-77982158 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 125-293 |
| Cow position: | chr2:14749739-14749571 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 128-270 |
| Cow position: | chr2:41314038-41313894 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 128-285 |
| Cow position: | chr2:70464576-70464421 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 129-236 |
| Cow position: | chr2:29545598-29545709 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 129-283 |
| Cow position: | chr2:32453387-32453543 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 122 |
| Conread position: | 129-288 |
| Cow position: | chr2:31155852-31155694 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 133-274 |
| Cow position: | chr2:24106536-24106392 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 133-289 |
| Cow position: | chr2:15162883-15162726 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 135-297 |
| Cow position: | chr2:37230038-37229876 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 143-288 |
| Cow position: | chr2:70579574-70579721 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 118 |
| Conread position: | 144-308 |
| Cow position: | chr2:31113967-31113795 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 129, 41 |
| Conread position: | 144-308 |
| Cow position: | chr2:70306271-70306106 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 46, 112 |
Show alignments to all cow chromosomes.