Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 91-283 |
| Cow position: | chr21:15239521-15239333 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 110-281 |
| Cow position: | chr21:8282488-8282327 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 113-292 |
| Cow position: | chr21:13358551-13358365 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-237 |
| Cow position: | chr21:23974055-23974180 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 114-255 |
| Cow position: | chr21:37120991-37121132 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 114-274 |
| Cow position: | chr21:35997393-35997235 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 114-283 |
| Cow position: | chr21:11675832-11675999 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 128 |
| Conread position: | 114-283 |
| Cow position: | chr21:12087817-12087639 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 155 |
| Conread position: | 114-283 |
| Cow position: | chr21:25286735-25286567 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 114-283 |
| Cow position: | chr21:47715324-47715496 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 114-293 |
| Cow position: | chr21:8671612-8671437 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 114-293 |
| Cow position: | chr21:45356055-45355871 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 148 |
| Conread position: | 114-297 |
| Cow position: | chr21:4276382-4276571 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 146 |
| Conread position: | 114-298 |
| Cow position: | chr21:18941613-18941802 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 147 |
| Conread position: | 115-270 |
| Cow position: | chr21:17806917-17807070 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 71, 127 |
| Conread position: | 119-306 |
| Cow position: | chr21:13256297-13256487 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 120-247 |
| Cow position: | chr21:30150028-30150155 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 120-283 |
| Cow position: | chr21:48290843-48291002 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 120-287 |
| Cow position: | chr21:9353663-9353493 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 142 |
| Conread position: | 120-295 |
| Cow position: | chr21:44754574-44754742 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 162, 76 |
| Conread position: | 121-259 |
| Cow position: | chr21:17428710-17428569 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 121-281 |
| Cow position: | chr21:26753705-26753543 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 122-267 |
| Cow position: | chr21:2413267-2413119 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 140 |
| Conread position: | 122-273 |
| Cow position: | chr21:31576705-31576556 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 122-282 |
| Cow position: | chr21:25800613-25800451 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 139 |
| Conread position: | 122-287 |
| Cow position: | chr21:13418021-13418185 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 122-288 |
| Cow position: | chr21:31662217-31662049 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 122-297 |
| Cow position: | chr21:36371696-36371520 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 123-275 |
| Cow position: | chr21:23786243-23786090 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 123-283 |
| Cow position: | chr21:23800916-23801078 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 123-283 |
| Cow position: | chr21:37718237-37718392 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 123-288 |
| Cow position: | chr21:19859956-19860122 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 123-288 |
| Cow position: | chr21:47823058-47823228 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 123-293 |
| Cow position: | chr21:33947041-33947209 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 125-248 |
| Cow position: | chr21:49661626-49661751 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 128-283 |
| Cow position: | chr21:23397643-23397796 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 129-281 |
| Cow position: | chr21:4099076-4098925 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 129-281 |
| Cow position: | chr21:34565008-34565157 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 93 |
| Conread position: | 130-283 |
| Cow position: | chr21:31662673-31662517 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 133-282 |
| Cow position: | chr21:15741882-15742038 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 140-305 |
| Cow position: | chr21:37848419-37848251 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 141-271 |
| Cow position: | chr21:24698675-24698543 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 120 |
Show alignments to all cow chromosomes.