Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 109-274 |
| Cow position: | chr25:8080886-8080719 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 109-288 |
| Cow position: | chr25:33246073-33245902 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 110-296 |
| Cow position: | chr25:20811216-20811399 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 113-242 |
| Cow position: | chr25:9109495-9109366 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 113-288 |
| Cow position: | chr25:20428474-20428299 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 114-228 |
| Cow position: | chr25:18228331-18228215 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 114-246 |
| Cow position: | chr25:20614878-20614745 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 114-252 |
| Cow position: | chr25:8511937-8512073 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 114-252 |
| Cow position: | chr25:20884933-20885070 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 114-273 |
| Cow position: | chr25:13562587-13562432 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 114-275 |
| Cow position: | chr25:12932781-12932618 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 114-275 |
| Cow position: | chr25:20624782-20624939 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 114-281 |
| Cow position: | chr25:26457522-26457691 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 114-283 |
| Cow position: | chr25:6178189-6178018 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 114-283 |
| Cow position: | chr25:18448966-18448797 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 114-284 |
| Cow position: | chr25:23410814-23410651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 114-288 |
| Cow position: | chr25:24405578-24405754 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 147 |
| Conread position: | 114-288 |
| Cow position: | chr25:40956832-40957005 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 114-288 |
| Cow position: | chr25:41093982-41094156 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 153 |
| Conread position: | 114-297 |
| Cow position: | chr25:8576848-8576663 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 115-307 |
| Cow position: | chr25:22575375-22575575 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 162, 48 |
| Conread position: | 119-275 |
| Cow position: | chr25:33111823-33111976 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 119-287 |
| Cow position: | chr25:10748349-10748514 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 120-240 |
| Cow position: | chr25:10204519-10204642 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 120-282 |
| Cow position: | chr25:26240688-26240524 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 138 |
| Conread position: | 120-293 |
| Cow position: | chr25:30021219-30021048 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 68, 122 |
| Conread position: | 121-273 |
| Cow position: | chr25:29312189-29312340 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 122-283 |
| Cow position: | chr25:33204933-33205094 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 122-288 |
| Cow position: | chr25:14570519-14570354 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 111 |
| Conread position: | 122-297 |
| Cow position: | chr25:13321330-13321152 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 122-308 |
| Cow position: | chr25:40339032-40338845 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 123-278 |
| Cow position: | chr25:13800097-13799940 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 123-294 |
| Cow position: | chr25:27534772-27534945 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 123-308 |
| Cow position: | chr25:27504053-27504233 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 128-271 |
| Cow position: | chr25:5365675-5365525 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 134 |
| Conread position: | 128-290 |
| Cow position: | chr25:18000389-18000552 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 133-297 |
| Cow position: | chr25:22909724-22909887 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 136-274 |
| Cow position: | chr25:16691790-16691658 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 147-283 |
| Cow position: | chr25:22542691-22542822 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.