Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 95-308 |
| Cow position: | chr28:11500699-11500922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 101-297 |
| Cow position: | chr28:9237489-9237291 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 104-287 |
| Cow position: | chr28:23668606-23668795 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 112-308 |
| Cow position: | chr28:11200725-11200918 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 113-283 |
| Cow position: | chr28:23703569-23703398 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 113-288 |
| Cow position: | chr28:4764040-4763866 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 114-241 |
| Cow position: | chr28:17625009-17625140 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 114-283 |
| Cow position: | chr28:20275290-20275121 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 114-283 |
| Cow position: | chr28:25825703-25825871 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 114-288 |
| Cow position: | chr28:3769508-3769678 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 114-288 |
| Cow position: | chr28:20963366-20963543 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 114-288 |
| Cow position: | chr28:33284947-33285124 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 148 |
| Conread position: | 114-293 |
| Cow position: | chr28:31165820-31166001 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 114-297 |
| Cow position: | chr28:6993455-6993631 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 116-230 |
| Cow position: | chr28:29455509-29455624 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 118-288 |
| Cow position: | chr28:7540000-7540171 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 119-240 |
| Cow position: | chr28:22421827-22421952 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 119-287 |
| Cow position: | chr28:8336119-8335948 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 120-297 |
| Cow position: | chr28:3822985-3823157 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 120-307 |
| Cow position: | chr28:31373263-31373073 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 122-259 |
| Cow position: | chr28:15406213-15406075 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 122-283 |
| Cow position: | chr28:34198953-34199115 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 123-281 |
| Cow position: | chr28:1202091-1202247 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 123-283 |
| Cow position: | chr28:1608345-1608179 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 125-293 |
| Cow position: | chr28:19253631-19253465 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 128-283 |
| Cow position: | chr28:11007349-11007190 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 128-288 |
| Cow position: | chr28:11181013-11181176 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 134 |
| Conread position: | 129-293 |
| Cow position: | chr28:15081774-15081939 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 136-283 |
| Cow position: | chr28:5406689-5406551 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 139-288 |
| Cow position: | chr28:21873897-21873746 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 126 |
Show alignments to all cow chromosomes.