Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 109-252 |
| Cow position: | chr29:23742105-23742247 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 109-283 |
| Cow position: | chr29:16054975-16055143 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 112-240 |
| Cow position: | chr29:11071529-11071658 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 112-248 |
| Cow position: | chr29:32520405-32520267 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 112-297 |
| Cow position: | chr29:11766872-11766690 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 114-237 |
| Cow position: | chr29:32080702-32080576 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 114-246 |
| Cow position: | chr29:9662171-9662036 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 114-259 |
| Cow position: | chr29:18021527-18021676 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 114-275 |
| Cow position: | chr29:39023182-39023347 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 153 |
| Conread position: | 114-282 |
| Cow position: | chr29:11366390-11366224 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 114-288 |
| Cow position: | chr29:5976634-5976804 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 114-293 |
| Cow position: | chr29:26985383-26985201 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 114-297 |
| Cow position: | chr29:1340938-1340754 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 114-308 |
| Cow position: | chr29:708975-709175 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 114-308 |
| Cow position: | chr29:7407749-7407943 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 115-297 |
| Cow position: | chr29:4367878-4367697 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 120-237 |
| Cow position: | chr29:19734811-19734691 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 120-259 |
| Cow position: | chr29:19607375-19607517 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 120-292 |
| Cow position: | chr29:22895877-22895701 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 68, 142 |
| Conread position: | 120-293 |
| Cow position: | chr29:25426509-25426680 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 133 |
| Conread position: | 120-294 |
| Cow position: | chr29:18963884-18963709 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 121-283 |
| Cow position: | chr29:5616719-5616884 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 121-293 |
| Cow position: | chr29:7663121-7663294 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 121-297 |
| Cow position: | chr29:6772278-6772103 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 121-308 |
| Cow position: | chr29:14758714-14758917 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 122-277 |
| Cow position: | chr29:9512408-9512250 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 122-288 |
| Cow position: | chr29:29302510-29302679 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 140 |
| Conread position: | 122-293 |
| Cow position: | chr29:7054560-7054394 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 123-237 |
| Cow position: | chr29:4658390-4658503 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 123-282 |
| Cow position: | chr29:26129641-26129484 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 119 |
| Conread position: | 123-286 |
| Cow position: | chr29:18073086-18072926 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 123-294 |
| Cow position: | chr29:41083295-41083122 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 136-280 |
| Cow position: | chr29:21675527-21675383 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 136-281 |
| Cow position: | chr29:18068038-18067894 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 137-297 |
| Cow position: | chr29:25923829-25923987 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 138-295 |
| Cow position: | chr29:18695382-18695220 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 148-297 |
| Cow position: | chr29:650396-650248 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 116, 40 |
Show alignments to all cow chromosomes.