Cow genome map

Conread name: rski0110_o3.y1

Conread position: 101-275
Cow position: chr6:43760564-43760400 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 101-283
Cow position: chr6:9026724-9026550 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 27

Conread position: 112-283
Cow position: chr6:6994759-6994925 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 109

Conread position: 113-269
Cow position: chr6:38594042-38594196 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 114-245
Cow position: chr6:37612303-37612169 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 114-268
Cow position: chr6:7707331-7707174 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 129

Conread position: 114-268
Cow position: chr6:28165022-28164866 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 143

Conread position: 114-272
Cow position: chr6:53939161-53939001 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 36

Conread position: 114-275
Cow position: chr6:47192328-47192490 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 61

Conread position: 114-281
Cow position: chr6:2324027-2324193 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 30

Conread position: 114-282
Cow position: chr6:38914638-38914470 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 122

Conread position: 114-283
Cow position: chr6:4163973-4164140 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 128

Conread position: 114-283
Cow position: chr6:54144500-54144333 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 128

Conread position: 114-284
Cow position: chr6:6367476-6367641 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 114-288
Cow position: chr6:24583034-24583200 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 99

Conread position: 114-288
Cow position: chr6:34549592-34549423 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 114-294
Cow position: chr6:35774785-35774969 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 148

Conread position: 114-297
Cow position: chr6:13718962-13718779 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 145

Conread position: 114-306
Cow position: chr6:24650040-24649840 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 30

Conread position: 115-285
Cow position: chr6:4023298-4023126 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 156

Conread position: 115-297
Cow position: chr6:15782318-15782503 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 142

Conread position: 119-282
Cow position: chr6:64427417-64427252 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 142

Conread position: 119-283
Cow position: chr6:46676238-46676401 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 120-240
Cow position: chr6:17708090-17708206 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 120-260
Cow position: chr6:36892142-36892281 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 120-265
Cow position: chr6:29649297-29649150 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 141

Conread position: 120-275
Cow position: chr6:827516-827669 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 116

Conread position: 120-275
Cow position: chr6:1890386-1890543 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 126

Conread position: 120-275
Cow position: chr6:16733606-16733454 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 90

Conread position: 120-275
Cow position: chr6:47858475-47858325 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 120-283
Cow position: chr6:510113-510276 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 43

Conread position: 120-283
Cow position: chr6:53674053-53673890 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 16

Conread position: 120-284
Cow position: chr6:10237525-10237363 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 122

Conread position: 120-293
Cow position: chr6:24545805-24545630 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 138

Conread position: 120-296
Cow position: chr6:51294477-51294299 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 142

Conread position: 120-308
Cow position: chr6:20255215-20255413 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 142

Conread position: 120-308
Cow position: chr6:38453590-38453787 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 125

Conread position: 121-275
Cow position: chr6:48572689-48572846 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 134

Conread position: 121-283
Cow position: chr6:24558068-24557911 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 38

Conread position: 121-283
Cow position: chr6:56376159-56376322 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 35

Conread position: 121-288
Cow position: chr6:3078691-3078536 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 121-297
Cow position: chr6:32798682-32798855 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 123

Conread position: 122-275
Cow position: chr6:50034540-50034692 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 136, 0

Conread position: 122-283
Cow position: chr6:19427640-19427483 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 120

Conread position: 122-308
Cow position: chr6:48806819-48807009 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 123-259
Cow position: chr6:15754031-15753893 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 40

Conread position: 123-283
Cow position: chr6:15997030-15997187 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 35

Conread position: 123-283
Cow position: chr6:53264611-53264779 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 123-293
Cow position: chr6:6943493-6943663 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 45

Conread position: 123-293
Cow position: chr6:59588220-59588387 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 46

Conread position: 123-293
Cow position: chr6:65872077-65871906 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 85

Conread position: 123-308
Cow position: chr6:29412600-29412783 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 113

Conread position: 124-280
Cow position: chr6:36194782-36194628 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 39

Conread position: 125-281
Cow position: chr6:18469047-18469197 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 125-281
Cow position: chr6:18582629-18582779 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 125-281
Cow position: chr6:30160504-30160353 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 33

Conread position: 125-288
Cow position: chr6:24622790-24622952 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 23

Conread position: 125-292
Cow position: chr6:7498281-7498443 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 128-259
Cow position: chr6:59496402-59496269 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 82

Conread position: 128-275
Cow position: chr6:40468-40616 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 44

Conread position: 128-294
Cow position: chr6:54478967-54479137 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 133

Conread position: 128-297
Cow position: chr6:60503561-60503390 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 130

Conread position: 129-271
Cow position: chr6:7173571-7173711 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 133-288
Cow position: chr6:32277124-32276967 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 128

Conread position: 137-283
Cow position: chr6:35415353-35415489 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 146-293
Cow position: chr6:2583025-2582876 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 115

Show alignments to all cow chromosomes.