Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 98-280 |
| Cow position: | chr7:22981552-22981370 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 112-248 |
| Cow position: | chr7:19423763-19423622 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 114-268 |
| Cow position: | chr7:45748840-45748993 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 114-271 |
| Cow position: | chr7:31224209-31224371 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 114-272 |
| Cow position: | chr7:41728141-41727987 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 114-275 |
| Cow position: | chr7:3748728-3748890 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 120 |
| Conread position: | 114-275 |
| Cow position: | chr7:51321931-51321776 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 114-280 |
| Cow position: | chr7:30404376-30404536 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 114-280 |
| Cow position: | chr7:37364982-37364825 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 114-280 |
| Cow position: | chr7:57537320-57537492 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 151 |
| Conread position: | 114-281 |
| Cow position: | chr7:51086356-51086184 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 114-283 |
| Cow position: | chr7:12754956-12755123 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 114-283 |
| Cow position: | chr7:13587380-13587210 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 146 |
| Conread position: | 114-283 |
| Cow position: | chr7:25445595-25445425 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 114-283 |
| Cow position: | chr7:32277736-32277570 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 118 |
| Conread position: | 114-288 |
| Cow position: | chr7:24667584-24667407 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 114-288 |
| Cow position: | chr7:53005548-53005376 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 114-292 |
| Cow position: | chr7:19880846-19881024 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 114-296 |
| Cow position: | chr7:48289566-48289387 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 114-297 |
| Cow position: | chr7:62610491-62610306 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 143 |
| Conread position: | 114-308 |
| Cow position: | chr7:37445064-37444865 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 115-288 |
| Cow position: | chr7:43234246-43234421 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 115-297 |
| Cow position: | chr7:1733005-1733183 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 170, 119 |
| Conread position: | 116-283 |
| Cow position: | chr7:20108795-20108960 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 127 |
| Conread position: | 119-294 |
| Cow position: | chr7:57311811-57311632 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 119-308 |
| Cow position: | chr7:39603516-39603324 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 120-240 |
| Cow position: | chr7:39494864-39494982 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 120-256 |
| Cow position: | chr7:10345274-10345412 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 120-266 |
| Cow position: | chr7:26466935-26466789 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 120-270 |
| Cow position: | chr7:4512626-4512770 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 88 |
| Conread position: | 120-281 |
| Cow position: | chr7:21197189-21197349 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 120-283 |
| Cow position: | chr7:37906168-37906329 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 120-288 |
| Cow position: | chr7:8786390-8786557 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 120-308 |
| Cow position: | chr7:57260057-57260258 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 121-293 |
| Cow position: | chr7:55714263-55714089 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 122-280 |
| Cow position: | chr7:17922470-17922312 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 122-283 |
| Cow position: | chr7:14044164-14044005 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 122-283 |
| Cow position: | chr7:19399485-19399648 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 139 |
| Conread position: | 122-293 |
| Cow position: | chr7:59246147-59245974 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 139 |
| Conread position: | 123-283 |
| Cow position: | chr7:25914298-25914458 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 63, 107 |
| Conread position: | 123-288 |
| Cow position: | chr7:26195615-26195778 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 123-289 |
| Cow position: | chr7:8073909-8074077 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 124-275 |
| Cow position: | chr7:41913509-41913661 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 108 |
| Conread position: | 124-283 |
| Cow position: | chr7:58490271-58490114 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 125-246 |
| Cow position: | chr7:34027953-34027832 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 125-269 |
| Cow position: | chr7:24521440-24521297 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 125-274 |
| Cow position: | chr7:40192939-40192785 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 139 |
| Conread position: | 125-308 |
| Cow position: | chr7:26665380-26665566 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 126-273 |
| Cow position: | chr7:23256667-23256816 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 135 |
| Conread position: | 128-288 |
| Cow position: | chr7:19948468-19948628 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 130-283 |
| Cow position: | chr7:47874805-47874954 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 139-288 |
| Cow position: | chr7:11872430-11872581 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 142-290 |
| Cow position: | chr7:62102765-62102618 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 94 |
Show alignments to all cow chromosomes.