Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 91-275 |
| Cow position: | chr8:20052728-20052915 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 184 |
| Conread position: | 101-283 |
| Cow position: | chr8:32277847-32278019 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 108-273 |
| Cow position: | chr8:46640163-46640325 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 110-273 |
| Cow position: | chr8:56033699-56033864 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 112-274 |
| Cow position: | chr8:36505545-36505386 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 112-281 |
| Cow position: | chr8:11249309-11249477 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 112-285 |
| Cow position: | chr8:26451294-26451118 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 112-294 |
| Cow position: | chr8:35218536-35218352 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 149 |
| Conread position: | 113-288 |
| Cow position: | chr8:24426823-24426647 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 147 |
| Conread position: | 114-252 |
| Cow position: | chr8:24766801-24766936 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 114-254 |
| Cow position: | chr8:18743661-18743521 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-258 |
| Cow position: | chr8:13738679-13738534 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 114-268 |
| Cow position: | chr8:13900568-13900414 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 61, 130 |
| Conread position: | 114-269 |
| Cow position: | chr8:36471708-36471556 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 127 |
| Conread position: | 114-275 |
| Cow position: | chr8:51904870-51905033 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 114-281 |
| Cow position: | chr8:942979-942813 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 114-281 |
| Cow position: | chr8:41318204-41318040 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 71, 128 |
| Conread position: | 114-283 |
| Cow position: | chr8:13810370-13810202 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 114-283 |
| Cow position: | chr8:29936086-29935913 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 72, 98 |
| Conread position: | 114-283 |
| Cow position: | chr8:43693376-43693210 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 114-288 |
| Cow position: | chr8:8134334-8134507 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 114-288 |
| Cow position: | chr8:55829180-55829354 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 114-297 |
| Cow position: | chr8:21282225-21282042 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 114-307 |
| Cow position: | chr8:39017873-39017676 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 147 |
| Conread position: | 114-307 |
| Cow position: | chr8:58334709-58334504 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 114-308 |
| Cow position: | chr8:15686233-15686437 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 115-273 |
| Cow position: | chr8:23161117-23160957 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 115-288 |
| Cow position: | chr8:37487130-37487305 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 115-288 |
| Cow position: | chr8:57388101-57387929 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 116-288 |
| Cow position: | chr8:50266457-50266279 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 145 |
| Conread position: | 117-294 |
| Cow position: | chr8:8901820-8901991 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 119-285 |
| Cow position: | chr8:6330841-6330677 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 120-270 |
| Cow position: | chr8:45163185-45163034 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 120-275 |
| Cow position: | chr8:27053440-27053591 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 120-281 |
| Cow position: | chr8:55305244-55305080 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 142 |
| Conread position: | 120-282 |
| Cow position: | chr8:49265140-49265304 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 120-283 |
| Cow position: | chr8:6469004-6469169 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 120-283 |
| Cow position: | chr8:9811963-9811798 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 120-283 |
| Cow position: | chr8:25075755-25075595 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 120-286 |
| Cow position: | chr8:24547178-24547014 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 125 |
| Conread position: | 120-287 |
| Cow position: | chr8:45586261-45586425 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 120-288 |
| Cow position: | chr8:13976052-13975887 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 120-308 |
| Cow position: | chr8:33510457-33510659 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 121-269 |
| Cow position: | chr8:23030794-23030647 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 122 |
| Conread position: | 121-282 |
| Cow position: | chr8:43803711-43803548 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 121-283 |
| Cow position: | chr8:19171453-19171624 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 121-288 |
| Cow position: | chr8:60320678-60320514 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 122-253 |
| Cow position: | chr8:32983941-32984076 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-279 |
| Cow position: | chr8:17077982-17077823 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 139 |
| Conread position: | 122-283 |
| Cow position: | chr8:20682558-20682392 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 129 |
| Conread position: | 122-283 |
| Cow position: | chr8:27294890-27294726 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 122-288 |
| Cow position: | chr8:33218790-33218962 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 143 |
| Conread position: | 122-297 |
| Cow position: | chr8:29946920-29947092 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 64 |
| Conread position: | 123-273 |
| Cow position: | chr8:26922782-26922631 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 123-281 |
| Cow position: | chr8:28221407-28221563 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 123-283 |
| Cow position: | chr8:32079523-32079681 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 123-283 |
| Cow position: | chr8:34317912-34318077 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 141 |
| Conread position: | 123-283 |
| Cow position: | chr8:37114752-37114909 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 80 |
| Conread position: | 123-288 |
| Cow position: | chr8:49599765-49599931 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 123-293 |
| Cow position: | chr8:11591078-11590910 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 123-308 |
| Cow position: | chr8:25573199-25573010 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 124-284 |
| Cow position: | chr8:11896362-11896200 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 64, 137 |
| Conread position: | 128-271 |
| Cow position: | chr8:49510746-49510884 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 128-275 |
| Cow position: | chr8:9583389-9583536 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 128-275 |
| Cow position: | chr8:54070902-54070757 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 128-283 |
| Cow position: | chr8:20832169-20832327 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 135-289 |
| Cow position: | chr8:52863965-52863810 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 135-297 |
| Cow position: | chr8:46850214-46850383 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 141-282 |
| Cow position: | chr8:40371263-40371403 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 145-283 |
| Cow position: | chr8:25871864-25871725 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 18 |
Show alignments to all cow chromosomes.