Cow genome map
| Conread name: | rski0110_o3.y1 |
| Conread position: | 98-283 |
| Cow position: | chr9:20839484-20839667 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 144 |
| Conread position: | 101-275 |
| Cow position: | chr9:50522477-50522313 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 101-288 |
| Cow position: | chr9:27292417-27292232 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 88, 5 |
| Conread position: | 109-288 |
| Cow position: | chr9:58669248-58669424 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 81, 135 |
| Conread position: | 112-232 |
| Cow position: | chr9:6346866-6346987 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 113-249 |
| Cow position: | chr9:62331127-62330988 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 113-281 |
| Cow position: | chr9:56860887-56861046 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 114-275 |
| Cow position: | chr9:20668259-20668408 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 114-280 |
| Cow position: | chr9:14184542-14184701 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 114-283 |
| Cow position: | chr9:12498882-12499053 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 76, 147 |
| Conread position: | 114-283 |
| Cow position: | chr9:20896772-20896939 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 114-283 |
| Cow position: | chr9:35708747-35708580 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 128 |
| Conread position: | 114-283 |
| Cow position: | chr9:39428928-39428757 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 114-284 |
| Cow position: | chr9:15684915-15684744 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 143 |
| Conread position: | 114-287 |
| Cow position: | chr9:19382200-19382373 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 114-288 |
| Cow position: | chr9:8599478-8599653 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 116 |
| Conread position: | 114-288 |
| Cow position: | chr9:39152808-39152635 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 131 |
| Conread position: | 114-288 |
| Cow position: | chr9:43911805-43911976 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 114-290 |
| Cow position: | chr9:26645792-26645976 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 153 |
| Conread position: | 114-293 |
| Cow position: | chr9:49651603-49651775 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 114-305 |
| Cow position: | chr9:42173313-42173117 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 114-308 |
| Cow position: | chr9:6203913-6203709 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 114-308 |
| Cow position: | chr9:11102928-11102732 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 114-308 |
| Cow position: | chr9:17110645-17110854 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 114-308 |
| Cow position: | chr9:32266514-32266314 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 114-308 |
| Cow position: | chr9:32847761-32847970 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 114-308 |
| Cow position: | chr9:48133605-48133809 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 115-293 |
| Cow position: | chr9:34204002-34204182 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 75, 146 |
| Conread position: | 119-285 |
| Cow position: | chr9:34309905-34310069 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 120-275 |
| Cow position: | chr9:5172211-5172361 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 120-275 |
| Cow position: | chr9:64008004-64007851 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 120-283 |
| Cow position: | chr9:15033786-15033945 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 120-283 |
| Cow position: | chr9:20039251-20039092 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 120-287 |
| Cow position: | chr9:8657553-8657383 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 120-287 |
| Cow position: | chr9:59761756-59761587 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 120-308 |
| Cow position: | chr9:33059394-33059201 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 121-305 |
| Cow position: | chr9:34568832-34568644 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 121-308 |
| Cow position: | chr9:47930991-47931181 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 123-270 |
| Cow position: | chr9:30019862-30020005 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 123-275 |
| Cow position: | chr9:15006868-15006719 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 123-282 |
| Cow position: | chr9:32817261-32817100 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 123-283 |
| Cow position: | chr9:21537148-21537310 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 123-284 |
| Cow position: | chr9:5828947-5829108 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 123-288 |
| Cow position: | chr9:34725629-34725466 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 123-288 |
| Cow position: | chr9:53794647-53794484 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 124-269 |
| Cow position: | chr9:35277958-35278108 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 124-288 |
| Cow position: | chr9:9200840-9200676 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 135 |
| Conread position: | 125-275 |
| Cow position: | chr9:54206442-54206290 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 136 |
| Conread position: | 125-288 |
| Cow position: | chr9:24837420-24837583 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 128-283 |
| Cow position: | chr9:15951274-15951114 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 128-285 |
| Cow position: | chr9:16118614-16118771 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 128-308 |
| Cow position: | chr9:43037368-43037553 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 133-285 |
| Cow position: | chr9:34106604-34106768 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 136-257 |
| Cow position: | chr9:18110969-18110848 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 136-287 |
| Cow position: | chr9:48576748-48576599 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 51 |
| Conread position: | 137-282 |
| Cow position: | chr9:58853414-58853552 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 137-297 |
| Cow position: | chr9:4858431-4858596 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 138-283 |
| Cow position: | chr9:21462970-21462827 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 144-286 |
| Cow position: | chr9:37099332-37099194 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 144-308 |
| Cow position: | chr9:49847117-49847278 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 30 |
| Conread position: | 150-306 |
| Cow position: | chr9:8617726-8617885 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 108 |
Show alignments to all cow chromosomes.