Cow genome map
| Conread name: | rski0119_a7.y1 |
| Conread position: | 132-314 |
| Cow position: | chr1:21478125-21477949 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 161, 27 |
| Conread position: | 136-324 |
| Cow position: | chr1:3746714-3746531 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 140-313 |
| Cow position: | chr1:34893181-34893010 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 153, 21 |
| Conread position: | 141-304 |
| Cow position: | chr1:78885253-78885412 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 141-324 |
| Cow position: | chr1:77755102-77755292 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 142-303 |
| Cow position: | chr1:52207595-52207433 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 142-315 |
| Cow position: | chr1:45979248-45979079 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 142-324 |
| Cow position: | chr1:54365013-54365188 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 143-315 |
| Cow position: | chr1:85839-85671 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 143-315 |
| Cow position: | chr1:23510190-23510357 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 144-325 |
| Cow position: | chr1:14559948-14560125 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 147-323 |
| Cow position: | chr1:6865808-6865981 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 148-315 |
| Cow position: | chr1:3750495-3750329 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 149-258 |
| Cow position: | chr1:71111723-71111831 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 149-289 |
| Cow position: | chr1:53568236-53568098 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 149-298 |
| Cow position: | chr1:22517281-22517139 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 149-315 |
| Cow position: | chr1:63134514-63134347 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 149-315 |
| Cow position: | chr1:79349035-79349205 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 149-320 |
| Cow position: | chr1:11878585-11878753 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 149-323 |
| Cow position: | chr1:101966758-101966926 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 150-286 |
| Cow position: | chr1:2203754-2203890 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 152-280 |
| Cow position: | chr1:23625424-23625298 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 152-311 |
| Cow position: | chr1:31232755-31232910 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 152-315 |
| Cow position: | chr1:37432979-37432814 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 152-324 |
| Cow position: | chr1:25885505-25885677 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 141, 66 |
| Conread position: | 152-324 |
| Cow position: | chr1:82572647-82572814 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 152-330 |
| Cow position: | chr1:88017234-88017409 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 153-294 |
| Cow position: | chr1:34311469-34311332 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 153-310 |
| Cow position: | chr1:64745155-64745312 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 153-324 |
| Cow position: | chr1:18223280-18223447 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 154-310 |
| Cow position: | chr1:90370166-90370319 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 154-349 |
| Cow position: | chr1:64098685-64098877 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 160, 64 |
| Conread position: | 155-324 |
| Cow position: | chr1:31951952-31951781 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 156-309 |
| Cow position: | chr1:39251582-39251430 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 137, 62 |
| Conread position: | 158-360 |
| Cow position: | chr1:85409275-85409474 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 163-324 |
| Cow position: | chr1:65155189-65155347 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 164-310 |
| Cow position: | chr1:61242304-61242159 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 129, 54 |
| Conread position: | 167-315 |
| Cow position: | chr1:71272602-71272455 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 171-324 |
| Cow position: | chr1:71555221-71555373 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 176-315 |
| Cow position: | chr1:64479391-64479533 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 186-320 |
| Cow position: | chr1:68332634-68332765 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.