Cow genome map
| Conread name: | rski0119_a7.y1 |
| Conread position: | 127-315 |
| Cow position: | chrX:19391623-19391809 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 139-324 |
| Cow position: | chrX:18814815-18814627 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 118 |
| Conread position: | 141-320 |
| Cow position: | chrX:4590585-4590409 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 141-320 |
| Cow position: | chrX:6472349-6472171 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 141-320 |
| Cow position: | chrX:18518673-18518496 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 141-329 |
| Cow position: | chrX:11675717-11675522 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 142-291 |
| Cow position: | chrX:40353945-40353801 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 142-312 |
| Cow position: | chrX:4440486-4440322 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 143-320 |
| Cow position: | chrX:30785188-30785017 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 148-303 |
| Cow position: | chrX:502935-503086 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 148-313 |
| Cow position: | chrX:20505335-20505173 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 149-291 |
| Cow position: | chrX:24886166-24886306 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 149-311 |
| Cow position: | chrX:25453801-25453639 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 69 |
| Conread position: | 149-313 |
| Cow position: | chrX:4625542-4625381 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 149-325 |
| Cow position: | chrX:1330169-1330343 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 149-334 |
| Cow position: | chrX:13403120-13403297 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 150-354 |
| Cow position: | chrX:25653714-25653498 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 151-320 |
| Cow position: | chrX:37749287-37749117 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 152-290 |
| Cow position: | chrX:2186882-2186746 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 152-290 |
| Cow position: | chrX:8557567-8557702 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 152-310 |
| Cow position: | chrX:6672405-6672251 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 152-311 |
| Cow position: | chrX:16817267-16817117 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 152-315 |
| Cow position: | chrX:9910132-9910294 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 153-311 |
| Cow position: | chrX:37981008-37980849 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 153-325 |
| Cow position: | chrX:35552964-35552800 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 45 |
| Conread position: | 154-311 |
| Cow position: | chrX:18699735-18699891 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 156-313 |
| Cow position: | chrX:24286678-24286527 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 156-315 |
| Cow position: | chrX:37236624-37236460 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 158-320 |
| Cow position: | chrX:1427894-1427735 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.