Cow genome map
| Conread name: | rski0136_c11.y1 |
| Conread position: | 379-620 |
| Cow position: | chr12:24152202-24152470 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 382-620 |
| Cow position: | chr12:31947986-31948240 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 227 |
| Conread position: | 383-494 |
| Cow position: | chr12:11583265-11583376 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-530 |
| Cow position: | chr12:3906338-3906495 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 383-530 |
| Cow position: | chr12:30753588-30753741 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 383-614 |
| Cow position: | chr12:20479458-20479215 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 384-619 |
| Cow position: | chr12:25192919-25193168 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 386-526 |
| Cow position: | chr12:10491141-10491289 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 388-530 |
| Cow position: | chr12:3950472-3950323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 388-530 |
| Cow position: | chr12:20326647-20326796 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-550 |
| Cow position: | chr12:6410859-6410688 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 388-586 |
| Cow position: | chr12:36313731-36313930 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 388-620 |
| Cow position: | chr12:4162494-4162245 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-620 |
| Cow position: | chr12:15050744-15050494 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 400-620 |
| Cow position: | chr12:35241216-35240975 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 173 |
| Conread position: | 402-614 |
| Cow position: | chr12:31269039-31269282 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 403-530 |
| Cow position: | chr12:18103721-18103590 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 403-530 |
| Cow position: | chr12:18964037-18963906 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 403-617 |
| Cow position: | chr12:42254557-42254794 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 409-529 |
| Cow position: | chr12:9914685-9914810 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 409-530 |
| Cow position: | chr12:4341844-4341722 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 409-530 |
| Cow position: | chr12:7558014-7557897 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 409-539 |
| Cow position: | chr12:44595915-44595779 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-581 |
| Cow position: | chr12:25529978-25530150 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 134, 34 |
| Conread position: | 409-586 |
| Cow position: | chr12:41581014-41581203 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 409-616 |
| Cow position: | chr12:35771123-35770896 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-619 |
| Cow position: | chr12:3623590-3623818 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 31, 197 |
| Conread position: | 409-619 |
| Cow position: | chr12:30590663-30590896 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 211 |
| Conread position: | 409-620 |
| Cow position: | chr12:33976096-33976331 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 410-530 |
| Cow position: | chr12:42285865-42285992 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 410-620 |
| Cow position: | chr12:31517276-31517055 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 411-525 |
| Cow position: | chr12:25188084-25188205 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 429-620 |
| Cow position: | chr12:40158103-40157900 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 437-619 |
| Cow position: | chr12:42181200-42181001 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 440-620 |
| Cow position: | chr12:10834192-10834004 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 182 |
| Conread position: | 449-620 |
| Cow position: | chr12:28885137-28884970 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.