Cow genome map
| Conread name: | rski0136_c11.y1 |
| Conread position: | 378-620 |
| Cow position: | chr13:49796103-49795858 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 383-529 |
| Cow position: | chr13:18243943-18243788 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-530 |
| Cow position: | chr13:9643810-9643962 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 383-530 |
| Cow position: | chr13:11096255-11096105 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 383-530 |
| Cow position: | chr13:50713282-50713135 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 383-539 |
| Cow position: | chr13:2414110-2413946 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 383-618 |
| Cow position: | chr13:24230291-24230031 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 383-620 |
| Cow position: | chr13:6974238-6973982 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 184 |
| Conread position: | 383-620 |
| Cow position: | chr13:21275936-21275676 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 249 |
| Conread position: | 383-620 |
| Cow position: | chr13:29831355-29831607 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 384-530 |
| Cow position: | chr13:43829317-43829169 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 387-530 |
| Cow position: | chr13:827317-827170 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 387-530 |
| Cow position: | chr13:8524541-8524693 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 388-522 |
| Cow position: | chr13:2463159-2463302 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-525 |
| Cow position: | chr13:20128738-20128596 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-530 |
| Cow position: | chr13:46736286-46736140 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-530 |
| Cow position: | chr13:60389418-60389563 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-539 |
| Cow position: | chr13:20839637-20839482 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 388-567 |
| Cow position: | chr13:25381034-25380846 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 388-572 |
| Cow position: | chr13:2774201-2773996 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 388-620 |
| Cow position: | chr13:20137898-20137637 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-620 |
| Cow position: | chr13:24753954-24753713 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 139, 197 |
| Conread position: | 389-620 |
| Cow position: | chr13:26480138-26480386 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 390-524 |
| Cow position: | chr13:7097997-7097862 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 391-539 |
| Cow position: | chr13:17563805-17563655 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 392-530 |
| Cow position: | chr13:13176719-13176575 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 392-569 |
| Cow position: | chr13:2192778-2192603 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 392-620 |
| Cow position: | chr13:6079351-6079583 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 141, 43 |
| Conread position: | 393-530 |
| Cow position: | chr13:39368028-39367884 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 393-530 |
| Cow position: | chr13:49022799-49022943 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 393-619 |
| Cow position: | chr13:15192823-15193067 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 393-620 |
| Cow position: | chr13:20360345-20360095 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 394-530 |
| Cow position: | chr13:8652371-8652517 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 394-551 |
| Cow position: | chr13:61166385-61166548 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 394-619 |
| Cow position: | chr13:62008178-62007928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 395-620 |
| Cow position: | chr13:620186-620428 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 403-529 |
| Cow position: | chr13:20649927-20650060 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 403-530 |
| Cow position: | chr13:19183923-19183793 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 404-620 |
| Cow position: | chr13:28552642-28552406 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 405-620 |
| Cow position: | chr13:25970050-25969825 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 195 |
| Conread position: | 409-530 |
| Cow position: | chr13:12925824-12925704 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 409-586 |
| Cow position: | chr13:17838000-17837806 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 171 |
| Conread position: | 409-620 |
| Cow position: | chr13:5758290-5758517 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 180 |
| Conread position: | 409-620 |
| Cow position: | chr13:12207094-12206881 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 166 |
| Conread position: | 409-620 |
| Cow position: | chr13:30026163-30025947 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 410-530 |
| Cow position: | chr13:37640633-37640514 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 410-579 |
| Cow position: | chr13:17110270-17110089 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 410-619 |
| Cow position: | chr13:2803522-2803307 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 180 |
| Conread position: | 410-620 |
| Cow position: | chr13:25561653-25561448 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 410-620 |
| Cow position: | chr13:34728792-34729023 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 412-530 |
| Cow position: | chr13:11643989-11643864 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 443-620 |
| Cow position: | chr13:56958980-56958797 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 449-620 |
| Cow position: | chr13:15143837-15144011 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 51 |
Show alignments to all cow chromosomes.