Cow genome map
| Conread name: | rski0136_c11.y1 |
| Conread position: | 369-525 |
| Cow position: | chr2:61485518-61485679 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 383-524 |
| Cow position: | chr2:30642753-30642608 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 383-530 |
| Cow position: | chr2:30351797-30351645 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 383-530 |
| Cow position: | chr2:39489688-39489835 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 99 |
| Conread position: | 383-530 |
| Cow position: | chr2:80963742-80963589 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 383-535 |
| Cow position: | chr2:44081339-44081503 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 383-542 |
| Cow position: | chr2:62644493-62644660 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 162 |
| Conread position: | 383-548 |
| Cow position: | chr2:34535252-34535078 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-551 |
| Cow position: | chr2:36936195-36936031 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 383-619 |
| Cow position: | chr2:80116004-80116263 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 383-620 |
| Cow position: | chr2:15250085-15250334 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 383-620 |
| Cow position: | chr2:69199410-69199155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 384-618 |
| Cow position: | chr2:47065018-47065277 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 386-620 |
| Cow position: | chr2:39815375-39815129 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 388-520 |
| Cow position: | chr2:39237328-39237464 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 388-530 |
| Cow position: | chr2:70945316-70945465 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 388-567 |
| Cow position: | chr2:51594676-51594863 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 388-583 |
| Cow position: | chr2:39663288-39663496 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 388-618 |
| Cow position: | chr2:19294504-19294757 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-619 |
| Cow position: | chr2:15298450-15298700 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 388-619 |
| Cow position: | chr2:41461280-41461517 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 165 |
| Conread position: | 388-620 |
| Cow position: | chr2:19137981-19137724 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-620 |
| Cow position: | chr2:42970021-42970273 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 20, 222 |
| Conread position: | 388-620 |
| Cow position: | chr2:51638468-51638700 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 388-620 |
| Cow position: | chr2:74964395-74964615 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 50 |
| Conread position: | 389-529 |
| Cow position: | chr2:42192350-42192498 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 389-560 |
| Cow position: | chr2:46194707-46194886 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 389-567 |
| Cow position: | chr2:23847914-23847723 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 392-571 |
| Cow position: | chr2:6282095-6281925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 392-616 |
| Cow position: | chr2:44482730-44482499 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 392-620 |
| Cow position: | chr2:24271151-24271381 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 132, 164 |
| Conread position: | 393-620 |
| Cow position: | chr2:42183286-42183532 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 221 |
| Conread position: | 403-585 |
| Cow position: | chr2:7524205-7524002 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 403-620 |
| Cow position: | chr2:40597503-40597739 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 403-620 |
| Cow position: | chr2:54700381-54700624 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 409-529 |
| Cow position: | chr2:55632713-55632836 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 409-539 |
| Cow position: | chr2:192531-192396 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 409-550 |
| Cow position: | chr2:46383530-46383381 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 409-586 |
| Cow position: | chr2:6901714-6901907 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 409-616 |
| Cow position: | chr2:27173305-27173525 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 409-620 |
| Cow position: | chr2:14734045-14734254 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 180, 123 |
| Conread position: | 409-620 |
| Cow position: | chr2:64323178-64323404 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 178 |
| Conread position: | 410-526 |
| Cow position: | chr2:32416923-32416803 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 410-539 |
| Cow position: | chr2:54790219-54790352 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 411-550 |
| Cow position: | chr2:78197810-78197953 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 412-530 |
| Cow position: | chr2:40410079-40410206 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 416-620 |
| Cow position: | chr2:28711059-28710842 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 187 |
| Conread position: | 437-571 |
| Cow position: | chr2:40840071-40840202 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 459-615 |
| Cow position: | chr2:46240178-46240029 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 62 |
Show alignments to all cow chromosomes.