Cow genome map
| Conread name: | rski0136_c11.y1 |
| Conread position: | 383-512 |
| Cow position: | chr21:13395565-13395697 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 383-530 |
| Cow position: | chr21:10001042-10001199 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-530 |
| Cow position: | chr21:12462003-12461843 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-530 |
| Cow position: | chr21:40432417-40432569 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 383-539 |
| Cow position: | chr21:34391008-34390842 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-539 |
| Cow position: | chr21:46849156-46848995 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 121 |
| Conread position: | 383-550 |
| Cow position: | chr21:19258797-19258966 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 383-619 |
| Cow position: | chr21:15911367-15911610 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 383-620 |
| Cow position: | chr21:20418717-20418476 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 166 |
| Conread position: | 384-530 |
| Cow position: | chr21:13585080-13584937 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 386-585 |
| Cow position: | chr21:33692-33912 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 388-525 |
| Cow position: | chr21:3818183-3818328 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-530 |
| Cow position: | chr21:10538277-10538131 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-530 |
| Cow position: | chr21:26244895-26245038 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 388-569 |
| Cow position: | chr21:30607114-30606919 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-618 |
| Cow position: | chr21:22210269-22210015 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-619 |
| Cow position: | chr21:20152929-20153186 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-620 |
| Cow position: | chr21:868950-868689 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 388-620 |
| Cow position: | chr21:4281896-4281653 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 388-620 |
| Cow position: | chr21:18064938-18064699 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 388-620 |
| Cow position: | chr21:20160653-20160909 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-620 |
| Cow position: | chr21:30231716-30231466 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 388-620 |
| Cow position: | chr21:33997252-33997020 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 389-533 |
| Cow position: | chr21:10727251-10727404 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 389-539 |
| Cow position: | chr21:1591526-1591687 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 389-570 |
| Cow position: | chr21:19513839-19514031 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 389-571 |
| Cow position: | chr21:24642494-24642691 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 389-616 |
| Cow position: | chr21:9416222-9416476 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 226 |
| Conread position: | 392-620 |
| Cow position: | chr21:32339756-32339515 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 393-618 |
| Cow position: | chr21:10264014-10264263 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 394-539 |
| Cow position: | chr21:42384491-42384641 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 394-598 |
| Cow position: | chr21:11360020-11360232 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 395-612 |
| Cow position: | chr21:17285093-17285301 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 409-526 |
| Cow position: | chr21:11198150-11198028 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 409-526 |
| Cow position: | chr21:37345099-37344981 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 409-529 |
| Cow position: | chr21:29405217-29405098 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 409-530 |
| Cow position: | chr21:15976631-15976757 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-530 |
| Cow position: | chr21:31159401-31159521 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 409-530 |
| Cow position: | chr21:36795598-36795727 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 409-530 |
| Cow position: | chr21:41597819-41597935 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-530 |
| Cow position: | chr21:46132573-46132698 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 409-530 |
| Cow position: | chr21:47363740-47363610 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-619 |
| Cow position: | chr21:957670-957898 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 409-620 |
| Cow position: | chr21:28919526-28919301 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 193 |
| Conread position: | 409-620 |
| Cow position: | chr21:32393052-32392832 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 40 |
| Conread position: | 409-620 |
| Cow position: | chr21:37014404-37014195 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 410-539 |
| Cow position: | chr21:5426940-5427073 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 410-569 |
| Cow position: | chr21:30256271-30256097 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 410-616 |
| Cow position: | chr21:29978761-29978538 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 184 |
| Conread position: | 411-529 |
| Cow position: | chr21:15584420-15584296 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 411-620 |
| Cow position: | chr21:36508241-36508463 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 411-620 |
| Cow position: | chr21:44724365-44724146 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 412-530 |
| Cow position: | chr21:977143-977024 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 412-530 |
| Cow position: | chr21:10004886-10004762 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 413-585 |
| Cow position: | chr21:7581900-7581712 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 444-620 |
| Cow position: | chr21:5538324-5538148 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 446-618 |
| Cow position: | chr21:28191396-28191577 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 474-620 |
| Cow position: | chr21:30977188-30977038 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 105 |
Show alignments to all cow chromosomes.