Cow genome map
| Conread name: | rski0136_c11.y1 |
| Conread position: | 367-530 |
| Cow position: | chr6:48169872-48170038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 370-620 |
| Cow position: | chr6:61884224-61883967 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 382-620 |
| Cow position: | chr6:12669047-12669304 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 383-526 |
| Cow position: | chr6:42565632-42565784 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-530 |
| Cow position: | chr6:35993529-35993684 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-542 |
| Cow position: | chr6:12337935-12338106 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 383-586 |
| Cow position: | chr6:19131379-19131600 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 383-620 |
| Cow position: | chr6:37462965-37463211 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 384-539 |
| Cow position: | chr6:45065070-45064908 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-513 |
| Cow position: | chr6:44984281-44984416 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 388-524 |
| Cow position: | chr6:11169649-11169793 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 118 |
| Conread position: | 388-530 |
| Cow position: | chr6:10176345-10176202 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 388-539 |
| Cow position: | chr6:33929599-33929438 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-550 |
| Cow position: | chr6:60667371-60667534 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 388-560 |
| Cow position: | chr6:57405172-57404998 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 142 |
| Conread position: | 388-619 |
| Cow position: | chr6:28482971-28483222 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 389-530 |
| Cow position: | chr6:17997364-17997220 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 389-539 |
| Cow position: | chr6:19292749-19292910 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 389-620 |
| Cow position: | chr6:5330362-5330620 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 390-616 |
| Cow position: | chr6:6067740-6067502 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 137, 53 |
| Conread position: | 390-620 |
| Cow position: | chr6:20196343-20196120 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 392-579 |
| Cow position: | chr6:23353510-23353698 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 392-618 |
| Cow position: | chr6:7119663-7119426 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 392-619 |
| Cow position: | chr6:60739973-60740215 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 50, 197 |
| Conread position: | 392-620 |
| Cow position: | chr6:15447246-15446987 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 403-526 |
| Cow position: | chr6:18049056-18048928 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 403-530 |
| Cow position: | chr6:1429609-1429740 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 403-569 |
| Cow position: | chr6:19013035-19013216 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 403-620 |
| Cow position: | chr6:23402022-23401789 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 404-530 |
| Cow position: | chr6:582303-582173 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 110 |
| Conread position: | 408-620 |
| Cow position: | chr6:51530212-51529979 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 408-620 |
| Cow position: | chr6:56986672-56986442 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 409-550 |
| Cow position: | chr6:28318378-28318521 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 93 |
| Conread position: | 409-554 |
| Cow position: | chr6:12845359-12845513 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 409-619 |
| Cow position: | chr6:7190145-7189924 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 410-616 |
| Cow position: | chr6:38771261-38771473 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 412-619 |
| Cow position: | chr6:58370731-58370952 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 412-620 |
| Cow position: | chr6:16700242-16700460 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 451-620 |
| Cow position: | chr6:54127792-54127615 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 122 |
Show alignments to all cow chromosomes.