Cow genome map

Conread name: rspc008_n3.y1

Conread position: 2-223
Cow position: chr10:8575118-8575337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 146

Conread position: 2-360
Cow position: chr10:48162319-48162678 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 19

Conread position: 2-383
Cow position: chr10:24099804-24099419 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 249
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 249

Conread position: 5-380
Cow position: chr10:58672180-58671813 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 35

Conread position: 9-380
Cow position: chr10:65347421-65347044 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 212

Conread position: 15-384
Cow position: chr10:45103855-45104224 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 160

Conread position: 17-379
Cow position: chr10:19542048-19541687 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 231

Conread position: 17-379
Cow position: chr10:37788643-37788276 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 233

Conread position: 17-380
Cow position: chr10:26922928-26922559 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 18-378
Cow position: chr10:55096422-55096784 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 239

Conread position: 18-380
Cow position: chr10:39648609-39648241 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 72, 0

Conread position: 20-333
Cow position: chr10:7497771-7497452 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 201

Conread position: 21-365
Cow position: chr10:18390087-18389738 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 23-223
Cow position: chr10:43081126-43081328 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 189

Conread position: 23-225
Cow position: chr10:7259903-7259698 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 23-225
Cow position: chr10:56078112-56078317 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 23-242
Cow position: chr10:58499523-58499300 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 23-262
Cow position: chr10:55930849-55931094 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 198

Conread position: 23-266
Cow position: chr10:48909302-48909551 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 198

Conread position: 23-282
Cow position: chr10:31021688-31021423 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 198

Conread position: 23-294
Cow position: chr10:39811144-39810867 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 67, 227

Conread position: 23-311
Cow position: chr10:48374078-48373785 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 48

Conread position: 23-333
Cow position: chr10:37125850-37125534 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 227

Conread position: 23-333
Cow position: chr10:53963803-53964119 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-354
Cow position: chr10:11623361-11623025 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 226

Conread position: 23-365
Cow position: chr10:42214242-42214589 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 226

Conread position: 23-367
Cow position: chr10:17959725-17960074 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 226

Conread position: 23-379
Cow position: chr10:326457-326818 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 49

Conread position: 23-379
Cow position: chr10:10173269-10173630 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-379
Cow position: chr10:49432476-49432829 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 224

Conread position: 23-379
Cow position: chr10:66496035-66495673 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 199

Conread position: 23-380
Cow position: chr10:1377127-1376765 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 31

Conread position: 23-380
Cow position: chr10:6221612-6221975 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:7274372-7274010 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:7826035-7825666 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:7895082-7894718 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 198

Conread position: 23-380
Cow position: chr10:12653570-12653933 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:14422255-14422618 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:14824928-14824565 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:14971335-14971698 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:15490194-15490557 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr10:15888349-15888705 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 26

Conread position: 23-380
Cow position: chr10:17124073-17123710 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:21889519-21889157 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 97

Conread position: 23-380
Cow position: chr10:26292122-26291757 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 229

Conread position: 23-380
Cow position: chr10:26539544-26539181 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 23-380
Cow position: chr10:28930737-28930374 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 198

Conread position: 23-380
Cow position: chr10:29777021-29777389 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 232

Conread position: 23-380
Cow position: chr10:30720062-30720425 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 227

Conread position: 23-380
Cow position: chr10:32581831-32582197 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 230

Conread position: 23-380
Cow position: chr10:32700317-32700680 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 137

Conread position: 23-380
Cow position: chr10:34334648-34334285 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:35823976-35823613 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:36879089-36878726 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:37138937-37138574 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:37908783-37908419 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 229

Conread position: 23-380
Cow position: chr10:39211139-39211502 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:44113933-44113570 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:45648222-45648585 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:47084394-47084757 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 23-380
Cow position: chr10:47909982-47910345 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:48241190-48240827 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 227

Conread position: 23-380
Cow position: chr10:52826262-52825899 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 326

Conread position: 23-380
Cow position: chr10:53081610-53081972 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr10:54376567-54376218 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:55600622-55600985 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 23-380
Cow position: chr10:55974904-55975267 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 23-380
Cow position: chr10:61323062-61323425 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr10:65810802-65810439 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 227

Conread position: 23-385
Cow position: chr10:22381084-22381451 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-391
Cow position: chr10:21397854-21397479 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-391
Cow position: chr10:21466402-21466027 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-411
Cow position: chr10:49504300-49504694 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 24-380
Cow position: chr10:325393-325033 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 27-349
Cow position: chr10:40643394-40643717 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 22

Conread position: 27-379
Cow position: chr10:6541842-6542199 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 176

Conread position: 27-380
Cow position: chr10:19843042-19843401 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 63, 223

Conread position: 31-367
Cow position: chr10:14846615-14846960 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 32-387
Cow position: chr10:45978187-45977829 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 83

Conread position: 48-365
Cow position: chr10:56687696-56687378 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 15

Conread position: 54-380
Cow position: chr10:62203003-62202671 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 55-380
Cow position: chr10:23472330-23472000 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 166

Conread position: 63-380
Cow position: chr10:18106350-18106027 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 158

Conread position: 64-380
Cow position: chr10:55975789-55976110 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 7

Conread position: 69-380
Cow position: chr10:44440536-44440221 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 70-387
Cow position: chr10:50962949-50963277 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 78

Conread position: 76-380
Cow position: chr10:26601399-26601709 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 182

Conread position: 89-379
Cow position: chr10:23877504-23877211 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 129

Conread position: 89-380
Cow position: chr10:45724892-45725186 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 129

Conread position: 92-380
Cow position: chr10:56109311-56109602 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 126

Conread position: 96-379
Cow position: chr10:56090686-56090973 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 63

Conread position: 98-385
Cow position: chr10:57457873-57458155 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 129, 150

Conread position: 99-367
Cow position: chr10:3999242-3999512 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 122

Conread position: 99-380
Cow position: chr10:52738694-52738410 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 108, 119

Conread position: 115-312
Cow position: chr10:32078591-32078391 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 103

Conread position: 115-379
Cow position: chr10:33933862-33933595 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 114, 132

Conread position: 115-380
Cow position: chr10:22281551-22281283 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 132

Conread position: 115-380
Cow position: chr10:40220718-40220986 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 103

Conread position: 118-380
Cow position: chr10:21693594-21693329 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 89, 100

Conread position: 122-380
Cow position: chr10:63659199-63659460 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 85, 96

Conread position: 140-378
Cow position: chr10:51408840-51409071 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 51

Conread position: 145-387
Cow position: chr10:14651018-14650777 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 42

Conread position: 157-380
Cow position: chr10:41742624-41742403 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 169-374
Cow position: chr10:49913999-49913794 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 77

Show alignments to all cow chromosomes.