Cow genome map

Conread name: rspc008_n3.y1

Conread position: 1-387
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 2-274
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 88, 35

Conread position: 2-387
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 11-384
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 17-378
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 17-378
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 17-387
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 18-381
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 19-384
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 23-207
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 23-225
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 23-242
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 198

Conread position: 23-271
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 198

Conread position: 23-283
Cow position:
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 227

Conread position: 23-293
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 198

Conread position: 23-310
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 235

Conread position: 23-310
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 67, 0

Conread position: 23-328
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 198

Conread position: 23-329
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 162

Conread position: 23-329
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-337
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 184, 70

Conread position: 23-379
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position:
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 54

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position:
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 200

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 226

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 16

Conread position: 23-380
Cow position:
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-385
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 106

Conread position: 23-386
Cow position:
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 24-380
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 226

Conread position: 25-384
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 234

Conread position: 26-380
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 193

Conread position: 27-312
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 63, 194

Conread position: 27-333
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 27-380
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 27-380
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 221

Conread position: 27-380
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 223

Conread position: 39-387
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 133

Conread position: 54-391
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 58-380
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 98

Conread position: 58-380
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 59-378
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 59-380
Cow position:
Alignm length: 329
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 68-377
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 68-380
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 153

Conread position: 68-380
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 181

Conread position: 77-380
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 130, 141

Conread position: 89-380
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 140, 158

Conread position: 92-330
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 137, 155

Conread position: 92-352
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 115, 126

Conread position: 100-380
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 107, 118

Conread position: 114-384
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 130

Conread position: 115-293
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 103

Conread position: 115-322
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 49

Conread position: 115-380
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 114, 132

Conread position: 115-380
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 92, 103

Conread position: 119-365
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 208, 13

Conread position: 132-380
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 115

Conread position: 132-388
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 86

Conread position: 156-367
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.