Cow genome map
Conread name: | rspc008_n3.y1 |
Conread position: | 1-387 |
Cow position: | chr14:48881645-48882028 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 95 |
Conread position: | 2-274 |
Cow position: | chr14:25430580-25430853 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 197 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 88, 35 |
Conread position: | 2-387 |
Cow position: | chr14:50121952-50122345 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 121 |
Conread position: | 11-384 |
Cow position: | chr14:45084847-45085233 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 148 |
Conread position: | 17-378 |
Cow position: | chr14:45848101-45848466 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 6 |
Conread position: | 17-378 |
Cow position: | chr14:50069254-50068887 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 233 |
Conread position: | 17-387 |
Cow position: | chr14:11564480-11564848 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 46 |
Conread position: | 18-381 |
Cow position: | chr14:43564402-43564771 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 55 |
Conread position: | 19-384 |
Cow position: | chr14:45192472-45192845 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 34 |
Conread position: | 23-207 |
Cow position: | chr14:15336683-15336496 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 128 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 23-225 |
Cow position: | chr14:34629245-34629040 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 23-242 |
Cow position: | chr14:34763679-34763901 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-271 |
Cow position: | chr14:8925046-8925300 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 179 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-283 |
Cow position: | chr14:4916837-4916571 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-293 |
Cow position: | chr14:13104891-13105164 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 196 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-310 |
Cow position: | chr14:29044723-29044430 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 202 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 67, 235 |
Conread position: | 23-310 |
Cow position: | chr14:50142074-50141782 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 23-328 |
Cow position: | chr14:38651861-38652172 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-329 |
Cow position: | chr14:1661386-1661688 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 216 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 60, 162 |
Conread position: | 23-329 |
Cow position: | chr14:22612752-22612440 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-337 |
Cow position: | chr14:32500122-32500431 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 184, 70 |
Conread position: | 23-379 |
Cow position: | chr14:24895621-24895982 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr14:2289203-2289560 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 54 |
Conread position: | 23-380 |
Cow position: | chr14:5113191-5112828 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr14:5645356-5645721 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 200 |
Conread position: | 23-380 |
Cow position: | chr14:8396830-8396467 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:10349911-10349549 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 226 |
Conread position: | 23-380 |
Cow position: | chr14:13370175-13370535 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:17488389-17488025 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 228 |
Conread position: | 23-380 |
Cow position: | chr14:17762438-17762076 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr14:19524002-19524365 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:21765149-21765512 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 228 |
Conread position: | 23-380 |
Cow position: | chr14:28350748-28350395 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:30581514-30581152 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 35 |
Conread position: | 23-380 |
Cow position: | chr14:31736929-31737292 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr14:31881938-31881576 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 40 |
Conread position: | 23-380 |
Cow position: | chr14:34168248-34168611 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr14:38047130-38047489 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 16 |
Conread position: | 23-380 |
Cow position: | chr14:38238146-38237782 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:40483512-40483149 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:40969105-40969458 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 249 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr14:46960337-46960700 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-385 |
Cow position: | chr14:10541939-10541576 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 254 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 67, 106 |
Conread position: | 23-386 |
Cow position: | chr14:9811631-9811998 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 14 |
Conread position: | 24-380 |
Cow position: | chr14:11462129-11461766 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 226 |
Conread position: | 25-384 |
Cow position: | chr14:38150074-38150446 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 234 |
Conread position: | 26-380 |
Cow position: | chr14:9047787-9048145 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 193 |
Conread position: | 27-312 |
Cow position: | chr14:47873170-47872879 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 206 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 63, 194 |
Conread position: | 27-333 |
Cow position: | chr14:31289812-31290124 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 194 |
Conread position: | 27-380 |
Cow position: | chr14:19317794-19318153 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 194 |
Conread position: | 27-380 |
Cow position: | chr14:32277564-32277207 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 221 |
Conread position: | 27-380 |
Cow position: | chr14:48572400-48572041 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 223 |
Conread position: | 39-387 |
Cow position: | chr14:38226058-38225724 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 133 |
Conread position: | 54-391 |
Cow position: | chr14:26129199-26128855 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 167 |
Conread position: | 58-380 |
Cow position: | chr14:13236830-13236506 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 98 |
Conread position: | 58-380 |
Cow position: | chr14:16806162-16805834 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 192 |
Conread position: | 59-378 |
Cow position: | chr14:30453553-30453228 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 59-380 |
Cow position: | chr14:9744661-9744335 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 162 |
Conread position: | 68-377 |
Cow position: | chr14:46178340-46178656 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 216 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 68-380 |
Cow position: | chr14:18191456-18191138 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 224 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 22, 153 |
Conread position: | 68-380 |
Cow position: | chr14:49063235-49063552 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 221 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 22, 181 |
Conread position: | 77-380 |
Cow position: | chr14:35016410-35016716 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 214 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 130, 141 |
Conread position: | 89-380 |
Cow position: | chr14:14443423-14443129 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 205 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 140, 158 |
Conread position: | 92-330 |
Cow position: | chr14:39063402-39063161 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 137, 155 |
Conread position: | 92-352 |
Cow position: | chr14:29114979-29114716 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 189 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 115, 126 |
Conread position: | 100-380 |
Cow position: | chr14:30432524-30432807 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 203 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 107, 118 |
Conread position: | 114-384 |
Cow position: | chr14:17076231-17076506 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 180 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 105, 130 |
Conread position: | 115-293 |
Cow position: | chr14:44292733-44292552 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 103 |
Conread position: | 115-322 |
Cow position: | chr14:21373179-21372974 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 94, 49 |
Conread position: | 115-380 |
Cow position: | chr14:29711549-29711817 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 190 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 114, 132 |
Conread position: | 115-380 |
Cow position: | chr14:44296947-44296679 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 194 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 92, 103 |
Conread position: | 119-365 |
Cow position: | chr14:40166737-40166491 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 208, 13 |
Conread position: | 132-380 |
Cow position: | chr14:21314373-21314122 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 176 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 97, 115 |
Conread position: | 132-388 |
Cow position: | chr14:15998665-15998924 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 182 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 75, 86 |
Conread position: | 156-367 |
Cow position: | chr14:11508731-11508517 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.