Cow genome map

Conread name: rspc008_n3.y1

Conread position: 1-387
Cow position: chr14:48881645-48882028 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 2-274
Cow position: chr14:25430580-25430853 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 88, 35

Conread position: 2-387
Cow position: chr14:50121952-50122345 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 11-384
Cow position: chr14:45084847-45085233 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 17-378
Cow position: chr14:45848101-45848466 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 17-378
Cow position: chr14:50069254-50068887 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 17-387
Cow position: chr14:11564480-11564848 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 18-381
Cow position: chr14:43564402-43564771 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 19-384
Cow position: chr14:45192472-45192845 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 23-207
Cow position: chr14:15336683-15336496 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 23-225
Cow position: chr14:34629245-34629040 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 23-242
Cow position: chr14:34763679-34763901 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 198

Conread position: 23-271
Cow position: chr14:8925046-8925300 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 198

Conread position: 23-283
Cow position: chr14:4916837-4916571 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 227

Conread position: 23-293
Cow position: chr14:13104891-13105164 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 198

Conread position: 23-310
Cow position: chr14:29044723-29044430 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 235

Conread position: 23-310
Cow position: chr14:50142074-50141782 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 67, 0

Conread position: 23-328
Cow position: chr14:38651861-38652172 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 198

Conread position: 23-329
Cow position: chr14:1661386-1661688 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 162

Conread position: 23-329
Cow position: chr14:22612752-22612440 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-337
Cow position: chr14:32500122-32500431 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 184, 70

Conread position: 23-379
Cow position: chr14:24895621-24895982 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr14:2289203-2289560 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 54

Conread position: 23-380
Cow position: chr14:5113191-5112828 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr14:5645356-5645721 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 200

Conread position: 23-380
Cow position: chr14:8396830-8396467 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:10349911-10349549 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 226

Conread position: 23-380
Cow position: chr14:13370175-13370535 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:17488389-17488025 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr14:17762438-17762076 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr14:19524002-19524365 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:21765149-21765512 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr14:28350748-28350395 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:30581514-30581152 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 23-380
Cow position: chr14:31736929-31737292 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr14:31881938-31881576 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 23-380
Cow position: chr14:34168248-34168611 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr14:38047130-38047489 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 16

Conread position: 23-380
Cow position: chr14:38238146-38237782 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:40483512-40483149 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:40969105-40969458 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr14:46960337-46960700 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-385
Cow position: chr14:10541939-10541576 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 106

Conread position: 23-386
Cow position: chr14:9811631-9811998 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 24-380
Cow position: chr14:11462129-11461766 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 226

Conread position: 25-384
Cow position: chr14:38150074-38150446 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 234

Conread position: 26-380
Cow position: chr14:9047787-9048145 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 193

Conread position: 27-312
Cow position: chr14:47873170-47872879 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 63, 194

Conread position: 27-333
Cow position: chr14:31289812-31290124 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 27-380
Cow position: chr14:19317794-19318153 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 27-380
Cow position: chr14:32277564-32277207 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 221

Conread position: 27-380
Cow position: chr14:48572400-48572041 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 223

Conread position: 39-387
Cow position: chr14:38226058-38225724 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 133

Conread position: 54-391
Cow position: chr14:26129199-26128855 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 58-380
Cow position: chr14:13236830-13236506 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 98

Conread position: 58-380
Cow position: chr14:16806162-16805834 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 59-378
Cow position: chr14:30453553-30453228 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 59-380
Cow position: chr14:9744661-9744335 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 68-377
Cow position: chr14:46178340-46178656 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 68-380
Cow position: chr14:18191456-18191138 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 153

Conread position: 68-380
Cow position: chr14:49063235-49063552 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 181

Conread position: 77-380
Cow position: chr14:35016410-35016716 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 130, 141

Conread position: 89-380
Cow position: chr14:14443423-14443129 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 140, 158

Conread position: 92-330
Cow position: chr14:39063402-39063161 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 137, 155

Conread position: 92-352
Cow position: chr14:29114979-29114716 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 115, 126

Conread position: 100-380
Cow position: chr14:30432524-30432807 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 107, 118

Conread position: 114-384
Cow position: chr14:17076231-17076506 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 130

Conread position: 115-293
Cow position: chr14:44292733-44292552 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 103

Conread position: 115-322
Cow position: chr14:21373179-21372974 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 49

Conread position: 115-380
Cow position: chr14:29711549-29711817 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 114, 132

Conread position: 115-380
Cow position: chr14:44296947-44296679 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 92, 103

Conread position: 119-365
Cow position: chr14:40166737-40166491 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 208, 13

Conread position: 132-380
Cow position: chr14:21314373-21314122 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 115

Conread position: 132-388
Cow position: chr14:15998665-15998924 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 86

Conread position: 156-367
Cow position: chr14:11508731-11508517 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.