Cow genome map

Conread name: rspc008_n3.y1

Conread position: 1-387
Cow position: chr18:37334160-37334526 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 179

Conread position: 3-333
Cow position: chr18:25200127-25200463 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 53

Conread position: 5-380
Cow position: chr18:45978748-45979117 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 16

Conread position: 16-380
Cow position: chr18:36135254-36134886 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 16-388
Cow position: chr18:43129470-43129827 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 17-380
Cow position: chr18:17335358-17334992 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 235

Conread position: 17-380
Cow position: chr18:27990140-27990509 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 19-221
Cow position: chr18:37492177-37492381 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 78, 152

Conread position: 19-310
Cow position: chr18:17354753-17355048 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 20

Conread position: 23-207
Cow position: chr18:6866616-6866803 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 23-223
Cow position: chr18:32164542-32164338 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 23-242
Cow position: chr18:19463073-19462851 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 23-290
Cow position: chr18:23688561-23688834 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 23-311
Cow position: chr18:11869876-11870170 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 227

Conread position: 23-321
Cow position: chr18:51690186-51690490 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-332
Cow position: chr18:21580165-21579850 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-378
Cow position: chr18:10292120-10292478 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-379
Cow position: chr18:603075-602714 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-379
Cow position: chr18:4954539-4954885 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 67, 133

Conread position: 23-379
Cow position: chr18:52574490-52574854 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-379
Cow position: chr18:55436745-55436383 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:16640837-16641200 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 198

Conread position: 23-380
Cow position: chr18:18215624-18215270 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 209

Conread position: 23-380
Cow position: chr18:19461669-19462032 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:24037457-24037099 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr18:26243069-26242708 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 294

Conread position: 23-380
Cow position: chr18:29079126-29079489 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:29240710-29241073 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 90

Conread position: 23-380
Cow position: chr18:30607085-30607448 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:42609287-42608924 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr18:42628753-42629116 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:47745142-47745503 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr18:51345677-51346040 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:51459452-51459093 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 66

Conread position: 23-380
Cow position: chr18:51580396-51580033 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:51602276-51601915 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:51698029-51698391 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 197

Conread position: 23-380
Cow position: chr18:52629869-52629506 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 23-380
Cow position: chr18:54047268-54047631 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr18:55554640-55555003 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 23-385
Cow position: chr18:50093055-50092688 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-387
Cow position: chr18:37733078-37733448 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-389
Cow position: chr18:13270299-13270664 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 67, 198

Conread position: 27-224
Cow position: chr18:51653988-51654188 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 0

Conread position: 27-380
Cow position: chr18:35443985-35443625 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 27-385
Cow position: chr18:24619822-24620176 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 33-378
Cow position: chr18:3190143-3190494 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 217

Conread position: 33-380
Cow position: chr18:30844507-30844154 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 188

Conread position: 42-380
Cow position: chr18:33617013-33616670 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 48-384
Cow position: chr18:41957937-41958275 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 153

Conread position: 54-380
Cow position: chr18:27995099-27995431 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 69-380
Cow position: chr18:55022235-55022552 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 152

Conread position: 92-380
Cow position: chr18:17741958-17742249 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 126

Conread position: 100-379
Cow position: chr18:12666957-12666676 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 70, 22

Conread position: 115-380
Cow position: chr18:16081973-16082238 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 103

Conread position: 121-384
Cow position: chr18:14479618-14479872 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 128

Conread position: 158-379
Cow position: chr18:3805116-3805337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 60

Show alignments to all cow chromosomes.