Cow genome map
Conread name: | rspc008_n3.y1 |
Conread position: | 1-387 |
Cow position: | chr18:37334160-37334526 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 20, 179 |
Conread position: | 3-333 |
Cow position: | chr18:25200127-25200463 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 217 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 12, 53 |
Conread position: | 5-380 |
Cow position: | chr18:45978748-45979117 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 16 |
Conread position: | 16-380 |
Cow position: | chr18:36135254-36134886 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 13 |
Conread position: | 16-388 |
Cow position: | chr18:43129470-43129827 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 56 |
Conread position: | 17-380 |
Cow position: | chr18:17335358-17334992 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 235 |
Conread position: | 17-380 |
Cow position: | chr18:27990140-27990509 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 19-221 |
Cow position: | chr18:37492177-37492381 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 161 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 78, 152 |
Conread position: | 19-310 |
Cow position: | chr18:17354753-17355048 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 82, 20 |
Conread position: | 23-207 |
Cow position: | chr18:6866616-6866803 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 23-223 |
Cow position: | chr18:32164542-32164338 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 140 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 23-242 |
Cow position: | chr18:19463073-19462851 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 149 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 23-290 |
Cow position: | chr18:23688561-23688834 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 184 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 23-311 |
Cow position: | chr18:11869876-11870170 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 208 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-321 |
Cow position: | chr18:51690186-51690490 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-332 |
Cow position: | chr18:21580165-21579850 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-378 |
Cow position: | chr18:10292120-10292478 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-379 |
Cow position: | chr18:603075-602714 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-379 |
Cow position: | chr18:4954539-4954885 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 252 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 67, 133 |
Conread position: | 23-379 |
Cow position: | chr18:52574490-52574854 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-379 |
Cow position: | chr18:55436745-55436383 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:16640837-16641200 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 198 |
Conread position: | 23-380 |
Cow position: | chr18:18215624-18215270 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 209 |
Conread position: | 23-380 |
Cow position: | chr18:19461669-19462032 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:24037457-24037099 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr18:26243069-26242708 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 294 |
Conread position: | 23-380 |
Cow position: | chr18:29079126-29079489 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:29240710-29241073 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 90 |
Conread position: | 23-380 |
Cow position: | chr18:30607085-30607448 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:42609287-42608924 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr18:42628753-42629116 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:47745142-47745503 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 23-380 |
Cow position: | chr18:51345677-51346040 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:51459452-51459093 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 66 |
Conread position: | 23-380 |
Cow position: | chr18:51580396-51580033 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:51602276-51601915 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:51698029-51698391 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 197 |
Conread position: | 23-380 |
Cow position: | chr18:52629869-52629506 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 50 |
Conread position: | 23-380 |
Cow position: | chr18:54047268-54047631 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-380 |
Cow position: | chr18:55554640-55555003 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 23-385 |
Cow position: | chr18:50093055-50092688 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-387 |
Cow position: | chr18:37733078-37733448 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 23-389 |
Cow position: | chr18:13270299-13270664 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 257 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 67, 198 |
Conread position: | 27-224 |
Cow position: | chr18:51653988-51654188 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 134 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 27-380 |
Cow position: | chr18:35443985-35443625 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 47 |
Conread position: | 27-385 |
Cow position: | chr18:24619822-24620176 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 22 |
Conread position: | 33-378 |
Cow position: | chr18:3190143-3190494 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 217 |
Conread position: | 33-380 |
Cow position: | chr18:30844507-30844154 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 188 |
Conread position: | 42-380 |
Cow position: | chr18:33617013-33616670 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 12 |
Conread position: | 48-384 |
Cow position: | chr18:41957937-41958275 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 234 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 52, 153 |
Conread position: | 54-380 |
Cow position: | chr18:27995099-27995431 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 196 |
Conread position: | 69-380 |
Cow position: | chr18:55022235-55022552 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 224 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 21, 152 |
Conread position: | 92-380 |
Cow position: | chr18:17741958-17742249 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 208 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 115, 126 |
Conread position: | 100-379 |
Cow position: | chr18:12666957-12666676 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 192 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 70, 22 |
Conread position: | 115-380 |
Cow position: | chr18:16081973-16082238 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 93, 103 |
Conread position: | 121-384 |
Cow position: | chr18:14479618-14479872 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 106, 128 |
Conread position: | 158-379 |
Cow position: | chr18:3805116-3805337 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 49, 60 |
Show alignments to all cow chromosomes.