Cow genome map

Conread name: rspc008_n3.y1

Conread position: 1-378
Cow position: chr19:10063172-10063532 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 142, 90

Conread position: 17-228
Cow position: chr19:49360313-49360110 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 17-379
Cow position: chr19:27082026-27081658 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 19-238
Cow position: chr19:51775539-51775319 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 181

Conread position: 21-331
Cow position: chr19:55217198-55217513 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 231

Conread position: 23-225
Cow position: chr19:8273678-8273473 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 23-271
Cow position: chr19:405543-405797 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 23-282
Cow position: chr19:39394596-39394861 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 23-291
Cow position: chr19:33528242-33528516 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 198

Conread position: 23-346
Cow position: chr19:52148031-52147702 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 23-352
Cow position: chr19:20611729-20612064 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-361
Cow position: chr19:5902422-5902764 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 228

Conread position: 23-363
Cow position: chr19:30037512-30037166 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-367
Cow position: chr19:29393737-29394087 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 23-378
Cow position: chr19:33119329-33118968 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-379
Cow position: chr19:776907-777273 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 133

Conread position: 23-379
Cow position: chr19:14180605-14180244 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 32

Conread position: 23-380
Cow position: chr19:3086188-3086547 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 45

Conread position: 23-380
Cow position: chr19:3406575-3406938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:10195808-10196166 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:10613623-10613983 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr19:12652270-12652633 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 23-380
Cow position: chr19:20928571-20928934 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:22512640-22512999 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 23-380
Cow position: chr19:26518936-26518578 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:29366923-29367286 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:29624431-29624793 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:30515647-30515284 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr19:41204832-41204469 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr19:48626454-48626813 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 223

Conread position: 23-380
Cow position: chr19:54542597-54542236 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 23-380
Cow position: chr19:55164262-55163899 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-501
Cow position: chr19:7078651-7079135 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 198

Conread position: 23-598
Cow position: chr19:19389229-19389810 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 201
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 67, 227

Conread position: 27-309
Cow position: chr19:4599415-4599699 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 200, 60

Conread position: 31-380
Cow position: chr19:40016186-40015835 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 54-380
Cow position: chr19:5680225-5679893 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 54-380
Cow position: chr19:24734563-24734895 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 54-380
Cow position: chr19:39923762-39924093 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 63-352
Cow position: chr19:16316784-16316489 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 27, 187

Conread position: 86-380
Cow position: chr19:35081690-35081987 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 161

Conread position: 92-380
Cow position: chr19:5887619-5887910 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 137, 155

Conread position: 100-323
Cow position: chr19:55215465-55215239 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 147

Conread position: 115-300
Cow position: chr19:473461-473273 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 103

Conread position: 115-380
Cow position: chr19:35363069-35362801 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 103

Show alignments to all cow chromosomes.