Cow genome map
| Conread name: | rspc008_n3.y1 |
| Conread position: | 1-232 |
| Cow position: | chr20:11888681-11888444 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 5-379 |
| Cow position: | chr20:35159250-35158871 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 15-302 |
| Cow position: | chr20:8099132-8099411 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 210, 81 |
| Conread position: | 16-380 |
| Cow position: | chr20:31784962-31784592 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 234 |
| Conread position: | 16-380 |
| Cow position: | chr20:37154615-37154245 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 235 |
| Conread position: | 17-234 |
| Cow position: | chr20:26999847-27000068 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 19-192 |
| Cow position: | chr20:25988104-25988279 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 23-242 |
| Cow position: | chr20:30546705-30546927 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-271 |
| Cow position: | chr20:11331316-11331062 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-312 |
| Cow position: | chr20:20439611-20439316 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-312 |
| Cow position: | chr20:30431629-30431932 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 60, 206 |
| Conread position: | 23-319 |
| Cow position: | chr20:14925284-14924982 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-358 |
| Cow position: | chr20:14327257-14326917 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 23-378 |
| Cow position: | chr20:8970535-8970190 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 92 |
| Conread position: | 23-379 |
| Cow position: | chr20:10099481-10099843 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-379 |
| Cow position: | chr20:10405052-10405415 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 23-379 |
| Cow position: | chr20:22185656-22185302 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 67, 174 |
| Conread position: | 23-380 |
| Cow position: | chr20:753799-754162 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 228 |
| Conread position: | 23-380 |
| Cow position: | chr20:775016-775378 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr20:826138-826506 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 67, 228 |
| Conread position: | 23-380 |
| Cow position: | chr20:5503389-5503020 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:6135633-6135270 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr20:7081458-7081095 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr20:8445770-8446133 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 228 |
| Conread position: | 23-380 |
| Cow position: | chr20:9223210-9223573 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:12177132-12176769 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:13303940-13303578 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:16515681-16516045 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 23-380 |
| Cow position: | chr20:16559174-16558811 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:19441284-19441640 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 23-380 |
| Cow position: | chr20:22048724-22049087 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:26052995-26052632 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr20:28323836-28324199 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr20:28443991-28443631 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:30384887-30384525 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 23-380 |
| Cow position: | chr20:30479467-30479830 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:32451997-32451634 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr20:36311145-36310782 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-386 |
| Cow position: | chr20:9007477-9007108 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 226 |
| Conread position: | 23-388 |
| Cow position: | chr20:31504691-31505062 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 26-380 |
| Cow position: | chr20:13619427-13619073 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 195 |
| Conread position: | 27-380 |
| Cow position: | chr20:30146793-30147152 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 194 |
| Conread position: | 27-393 |
| Cow position: | chr20:35691529-35691164 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 14 |
| Conread position: | 52-388 |
| Cow position: | chr20:35072769-35073110 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 54-379 |
| Cow position: | chr20:14585486-14585827 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 204 |
| Conread position: | 60-380 |
| Cow position: | chr20:39391747-39391421 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 63-380 |
| Cow position: | chr20:18651007-18651330 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 66-380 |
| Cow position: | chr20:25122840-25122516 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 73-380 |
| Cow position: | chr20:40504314-40504001 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 89-379 |
| Cow position: | chr20:2881421-2881129 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 138, 223 |
| Conread position: | 89-379 |
| Cow position: | chr20:22274682-22274388 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 93-378 |
| Cow position: | chr20:16448902-16449186 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 106-382 |
| Cow position: | chr20:38123167-38123455 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 114-380 |
| Cow position: | chr20:24620652-24620921 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 93, 104 |
| Conread position: | 115-323 |
| Cow position: | chr20:4725655-4725866 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 92, 103 |
| Conread position: | 115-380 |
| Cow position: | chr20:28100360-28100092 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 92, 103 |
| Conread position: | 119-363 |
| Cow position: | chr20:28714773-28714525 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 88, 129 |
| Conread position: | 119-380 |
| Cow position: | chr20:17863581-17863845 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 124-333 |
| Cow position: | chr20:3652525-3652311 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 127 |
Show alignments to all cow chromosomes.