Cow genome map
| Conread name: | rspc008_n3.y1 |
| Conread position: | 2-302 |
| Cow position: | chr24:36478443-36478132 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 2-386 |
| Cow position: | chr24:36562938-36562551 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 5-384 |
| Cow position: | chr24:34319319-34319707 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 17-279 |
| Cow position: | chr24:39258223-39258482 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 190, 50 |
| Conread position: | 17-380 |
| Cow position: | chr24:9549639-9550002 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 17-380 |
| Cow position: | chr24:26412422-26412790 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 195 |
| Conread position: | 17-380 |
| Cow position: | chr24:29064594-29064229 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 72, 233 |
| Conread position: | 17-387 |
| Cow position: | chr24:2073978-2074359 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 224 |
| Conread position: | 18-365 |
| Cow position: | chr24:7404542-7404194 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 20-333 |
| Cow position: | chr24:22953940-22954259 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 230 |
| Conread position: | 23-207 |
| Cow position: | chr24:2947940-2948127 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-271 |
| Cow position: | chr24:14194468-14194214 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-312 |
| Cow position: | chr24:13191543-13191836 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 23-337 |
| Cow position: | chr24:40552006-40552319 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 23-379 |
| Cow position: | chr24:6325992-6325629 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 228 |
| Conread position: | 23-379 |
| Cow position: | chr24:15296496-15296858 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-379 |
| Cow position: | chr24:17161597-17161235 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:207615-207257 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:1841491-1841127 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:3793863-3794226 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:3850976-3851339 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:5929160-5929522 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:9900752-9901115 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:10035663-10035300 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:11081399-11081039 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:11104771-11104408 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:11208226-11207863 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:12446875-12447235 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:12696742-12696380 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 229 |
| Conread position: | 23-380 |
| Cow position: | chr24:13235647-13236010 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 197 |
| Conread position: | 23-380 |
| Cow position: | chr24:13491877-13492239 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 23-380 |
| Cow position: | chr24:14250202-14249839 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 23-380 |
| Cow position: | chr24:14352733-14353089 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:17188893-17188529 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:18112836-18113199 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr24:18740988-18740625 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr24:20604130-20604492 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:27345515-27345152 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr24:30681752-30681389 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:33640117-33639754 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:38296437-38296800 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:39067487-39067124 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr24:40428313-40427950 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr24:40519222-40518869 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 23-384 |
| Cow position: | chr24:3162851-3163218 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-385 |
| Cow position: | chr24:31067664-31067303 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-389 |
| Cow position: | chr24:22794940-22795309 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 27-380 |
| Cow position: | chr24:6067958-6067603 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 256 |
| Conread position: | 32-380 |
| Cow position: | chr24:12377726-12377372 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 254 |
| Conread position: | 32-380 |
| Cow position: | chr24:36268415-36268062 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 54-380 |
| Cow position: | chr24:26794828-26795160 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 65-377 |
| Cow position: | chr24:15880561-15880875 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 181 |
| Conread position: | 72-379 |
| Cow position: | chr24:38487693-38488002 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 73-380 |
| Cow position: | chr24:15084010-15084323 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 75-336 |
| Cow position: | chr24:7782691-7782424 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 81-328 |
| Cow position: | chr24:21094829-21094580 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 89-379 |
| Cow position: | chr24:11748659-11748367 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 140, 157 |
| Conread position: | 96-367 |
| Cow position: | chr24:26793140-26792868 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 129, 43 |
| Conread position: | 96-378 |
| Cow position: | chr24:12293149-12293434 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 111, 122 |
| Conread position: | 115-380 |
| Cow position: | chr24:34270670-34270932 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 169-382 |
| Cow position: | chr24:22288065-22288277 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 174-387 |
| Cow position: | chr24:7088422-7088205 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 43 |
Show alignments to all cow chromosomes.