Cow genome map
| Conread name: | rspc008_n3.y1 |
| Conread position: | 2-387 |
| Cow position: | chr25:24637083-24636696 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 215 |
| Conread position: | 3-367 |
| Cow position: | chr25:21966448-21966817 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 5-232 |
| Cow position: | chr25:14823918-14823686 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 86, 175 |
| Conread position: | 16-384 |
| Cow position: | chr25:2648316-2648682 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 17-239 |
| Cow position: | chr25:34503150-34502925 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 17-386 |
| Cow position: | chr25:33262701-33263085 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 119 |
| Conread position: | 19-387 |
| Cow position: | chr25:13941660-13941290 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 232 |
| Conread position: | 20-380 |
| Cow position: | chr25:19923596-19923960 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 201 |
| Conread position: | 23-216 |
| Cow position: | chr25:31073518-31073321 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-267 |
| Cow position: | chr25:7223354-7223104 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-271 |
| Cow position: | chr25:11124844-11125098 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-320 |
| Cow position: | chr25:26705804-26705501 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-336 |
| Cow position: | chr25:27019160-27018842 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 236 |
| Conread position: | 23-367 |
| Cow position: | chr25:17904718-17905068 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr25:4858421-4858057 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 228 |
| Conread position: | 23-380 |
| Cow position: | chr25:8655370-8655730 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 23-380 |
| Cow position: | chr25:9413425-9413784 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 223 |
| Conread position: | 23-380 |
| Cow position: | chr25:15429602-15429239 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr25:16922712-16922355 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 235 |
| Conread position: | 23-380 |
| Cow position: | chr25:17211056-17210694 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 23-380 |
| Cow position: | chr25:17808700-17808338 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 23-380 |
| Cow position: | chr25:18190298-18189938 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 224 |
| Conread position: | 23-380 |
| Cow position: | chr25:18330698-18330335 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 228 |
| Conread position: | 23-380 |
| Cow position: | chr25:19139494-19139131 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr25:19337247-19336886 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 23-380 |
| Cow position: | chr25:26781008-26780645 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr25:27145503-27145863 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 188 |
| Conread position: | 23-380 |
| Cow position: | chr25:29525789-29525427 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-380 |
| Cow position: | chr25:32610342-32609979 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-380 |
| Cow position: | chr25:34164483-34164121 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 23-380 |
| Cow position: | chr25:35553745-35554109 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 228 |
| Conread position: | 23-380 |
| Cow position: | chr25:36350816-36351179 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 227 |
| Conread position: | 23-384 |
| Cow position: | chr25:29802667-29802300 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 23-387 |
| Cow position: | chr25:3688213-3688583 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 24-207 |
| Cow position: | chr25:29357933-29357747 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 24-331 |
| Cow position: | chr25:24137432-24137124 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 96 |
| Conread position: | 24-380 |
| Cow position: | chr25:8934875-8935237 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 226 |
| Conread position: | 26-388 |
| Cow position: | chr25:21120390-21120762 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 195 |
| Conread position: | 27-380 |
| Cow position: | chr25:34509097-34508741 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 27-380 |
| Cow position: | chr25:35589159-35589518 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 194 |
| Conread position: | 33-379 |
| Cow position: | chr25:41356709-41356362 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 181 |
| Conread position: | 54-380 |
| Cow position: | chr25:34121987-34121653 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 197 |
| Conread position: | 68-332 |
| Cow position: | chr25:15453139-15453409 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 76-380 |
| Cow position: | chr25:17994392-17994082 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 76-380 |
| Cow position: | chr25:36127775-36127467 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 92-380 |
| Cow position: | chr25:27076211-27076498 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 115, 126 |
Show alignments to all cow chromosomes.