Cow genome map
| Conread name: | rspc008_n3.y1 | 
| Conread position: | 12-262 | 
| Cow position: | chr6:13405476-13405707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 77, 9 | 
| Conread position: | 15-381 | 
| Cow position: | chr6:44920684-44921048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 27, 11 | 
| Conread position: | 16-310 | 
| Cow position: | chr6:56925990-56926290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 74, 234 | 
| Conread position: | 17-379 | 
| Cow position: | chr6:11389356-11388988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 204 | 
| Conread position: | 17-380 | 
| Cow position: | chr6:16050035-16049669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 204 | 
| Conread position: | 17-380 | 
| Cow position: | chr6:27173096-27173468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 207 | 
| Conread position: | 17-381 | 
| Cow position: | chr6:24631988-24631626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 73 | 
| Conread position: | 18-380 | 
| Cow position: | chr6:22043750-22043383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 72, 203 | 
| Conread position: | 19-377 | 
| Cow position: | chr6:27341859-27342209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 82, 27 | 
| Conread position: | 20-380 | 
| Cow position: | chr6:34017461-34017097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 228 | 
| Conread position: | 20-391 | 
| Cow position: | chr6:62961163-62961530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 70, 93 | 
| Conread position: | 21-384 | 
| Cow position: | chr6:5130205-5129858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 23-187 | 
| Cow position: | chr6:1109272-1109439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-207 | 
| Cow position: | chr6:17773250-17773437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-216 | 
| Cow position: | chr6:653533-653336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-229 | 
| Cow position: | chr6:6557225-6557435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-242 | 
| Cow position: | chr6:508258-508035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 23-284 | 
| Cow position: | chr6:20268050-20267786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 67, 196 | 
| Conread position: | 23-297 | 
| Cow position: | chr6:23568329-23568049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-297 | 
| Cow position: | chr6:31912911-31912631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-307 | 
| Cow position: | chr6:21857108-21856821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 67, 110 | 
| Conread position: | 23-310 | 
| Cow position: | chr6:65819318-65819025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-330 | 
| Cow position: | chr6:56451831-56451529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 67, 197 | 
| Conread position: | 23-333 | 
| Cow position: | chr6:8382203-8382519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-367 | 
| Cow position: | chr6:1402295-1401950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 127 | 
| Conread position: | 23-367 | 
| Cow position: | chr6:3987792-3987442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-377 | 
| Cow position: | chr6:53543219-53542859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-379 | 
| Cow position: | chr6:11869670-11869309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 83 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:126868-126508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 18 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:451999-451637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:888821-889182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:1245657-1245294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:2875770-2875409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:7138078-7137715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:7448759-7449122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:7467386-7467024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 35 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:9234775-9235139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 228 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:10044479-10044833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 117 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:11019922-11020285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:11401584-11401947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:11453603-11453240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:12971660-12972023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:12997685-12998043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 18 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:13308134-13307771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:17386787-17387150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:18803795-18803432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 67, 78 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:19103644-19103281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 222 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:20216132-20215769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:20581512-20581152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:21163567-21163930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:21711970-21712333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:22737442-22737079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:25374844-25374481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:26324936-26324573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:26667760-26667398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 112 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:26771857-26771495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 14 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:26829791-26830154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 235 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:28001132-28000769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:33809170-33808807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:37216907-37217266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 20 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:39897799-39897436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:39912586-39912949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:42897451-42897817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 228 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:43087334-43086988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 67, 26 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:44146683-44146324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 97 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:45479824-45479461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:45937543-45937906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:45975763-45976126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:51150206-51150569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:53537340-53537703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:55238954-55239317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:55361531-55361168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:57329542-57329905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:57521439-57521802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:60379427-60379790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:62333485-62333123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 67, 228 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:62665039-62665402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 227 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:63177307-63177670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-380 | 
| Cow position: | chr6:63715012-63714649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 23-384 | 
| Cow position: | chr6:67553496-67553863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 23-385 | 
| Cow position: | chr6:14928723-14929079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 220, 49 | 
| Conread position: | 23-385 | 
| Cow position: | chr6:63041065-63040701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 70 | 
| Conread position: | 23-616 | 
| Cow position: | chr6:31941131-31941730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 67, 198 | 
| Conread position: | 24-380 | 
| Cow position: | chr6:39080182-39080544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 197 | 
| Conread position: | 27-328 | 
| Cow position: | chr6:16645154-16645459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 63, 40 | 
| Conread position: | 27-387 | 
| Cow position: | chr6:39848186-39848544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 64, 36 | 
| Conread position: | 31-385 | 
| Cow position: | chr6:28108051-28107700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 127 | 
| Conread position: | 32-366 | 
| Cow position: | chr6:58951206-58950877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 58 | 
| Conread position: | 33-380 | 
| Cow position: | chr6:45723849-45723498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 186 | 
| Conread position: | 53-210 | 
| Cow position: | chr6:21584759-21584602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 54-380 | 
| Cow position: | chr6:3152510-3152839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 36, 167 | 
| Conread position: | 54-380 | 
| Cow position: | chr6:38917745-38917413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 167 | 
| Conread position: | 54-386 | 
| Cow position: | chr6:10536684-10536346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 167 | 
| Conread position: | 56-363 | 
| Cow position: | chr6:42761375-42761065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 173, 191 | 
| Conread position: | 63-380 | 
| Cow position: | chr6:54900393-54900716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 158 | 
| Conread position: | 71-380 | 
| Cow position: | chr6:54979217-54978902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 179 | 
| Conread position: | 71-386 | 
| Cow position: | chr6:28400957-28401278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 150 | 
| Conread position: | 79-380 | 
| Cow position: | chr6:20514904-20515202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 11, 66 | 
| Conread position: | 87-380 | 
| Cow position: | chr6:444597-444301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 8, 31 | 
| Conread position: | 89-380 | 
| Cow position: | chr6:57308557-57308851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 154, 184 | 
| Conread position: | 99-380 | 
| Cow position: | chr6:41495494-41495211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 108, 119 | 
| Conread position: | 99-380 | 
| Cow position: | chr6:56557269-56556985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 108, 119 | 
| Conread position: | 111-380 | 
| Cow position: | chr6:30704730-30705002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 118, 136 | 
| Conread position: | 113-301 | 
| Cow position: | chr6:27150827-27150636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 94, 105 | 
| Conread position: | 115-378 | 
| Cow position: | chr6:28487302-28487036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 92, 103 | 
| Conread position: | 115-380 | 
| Cow position: | chr6:41823478-41823210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 114, 132 | 
| Conread position: | 118-380 | 
| Cow position: | chr6:41158959-41158694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 89, 100 | 
| Conread position: | 120-354 | 
| Cow position: | chr6:65943255-65943492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 87, 98 | 
| Conread position: | 123-380 | 
| Cow position: | chr6:1637590-1637330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 102, 124 | 
| Conread position: | 139-387 | 
| Cow position: | chr6:19145707-19145457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 67, 110 | 
| Conread position: | 142-333 | 
| Cow position: | chr6:49579492-49579686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 65, 76 | 
| Conread position: | 157-380 | 
| Cow position: | chr6:61051722-61051496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 50, 61 | 
| Conread position: | 160-378 | 
| Cow position: | chr6:4021918-4022153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 19, 0 | 
Show alignments to all cow chromosomes.
