Cow genome map

Conread name: rspc008_n3.y1

Conread position: 1-242
Cow position: chr8:7598010-7598258 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 37

Conread position: 8-388
Cow position: chr8:44650626-44651016 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 16-380
Cow position: chr8:18568369-18568006 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 136

Conread position: 17-377
Cow position: chr8:32966656-32967020 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 186

Conread position: 17-380
Cow position: chr8:1468669-1469036 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 25

Conread position: 17-380
Cow position: chr8:60769869-60769500 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 204

Conread position: 17-381
Cow position: chr8:38249410-38249044 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 39

Conread position: 20-380
Cow position: chr8:51882516-51882154 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 226

Conread position: 20-384
Cow position: chr8:21116282-21115906 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 23-216
Cow position: chr8:19893558-19893755 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 23-227
Cow position: chr8:42159166-42159374 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 199

Conread position: 23-229
Cow position: chr8:7276256-7276466 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 23-274
Cow position: chr8:32628476-32628218 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 229

Conread position: 23-276
Cow position: chr8:14302237-14302496 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 198

Conread position: 23-311
Cow position: chr8:16940430-16940141 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 186, 70

Conread position: 23-333
Cow position: chr8:54479062-54479378 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-337
Cow position: chr8:46645381-46645062 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 121

Conread position: 23-366
Cow position: chr8:4615091-4614742 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-366
Cow position: chr8:8381938-8382287 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-377
Cow position: chr8:53838471-53838831 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-379
Cow position: chr8:8514537-8514176 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 49

Conread position: 23-379
Cow position: chr8:28879939-28880300 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 227

Conread position: 23-380
Cow position: chr8:795663-795305 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 23-380
Cow position: chr8:1322559-1322923 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 228

Conread position: 23-380
Cow position: chr8:1500412-1500049 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 113

Conread position: 23-380
Cow position: chr8:1508794-1508431 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 198

Conread position: 23-380
Cow position: chr8:3333122-3332759 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 23-380
Cow position: chr8:3956719-3957081 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 226

Conread position: 23-380
Cow position: chr8:5195652-5196015 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:6464609-6464246 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:6588494-6588131 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:7051309-7050946 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:8652816-8652453 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:9739061-9739424 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:10751888-10752251 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:11240851-11241214 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 198

Conread position: 23-380
Cow position: chr8:12078269-12077906 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:16194658-16195021 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:16733066-16732707 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 23-380
Cow position: chr8:17434241-17434604 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:21043132-21043496 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr8:21090791-21090428 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:22531686-22531324 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:24724335-24724698 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:25065460-25065823 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:25613812-25614175 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:26879078-26879441 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:27552142-27551779 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:31735466-31735829 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:32607844-32607481 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr8:33045463-33045100 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:35128255-35127896 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:36665606-36665244 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 23-380
Cow position: chr8:39141184-39141547 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:39740150-39739788 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:40584608-40584971 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:41659272-41658908 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 228

Conread position: 23-380
Cow position: chr8:42317729-42317366 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:47066063-47065700 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:49964383-49964020 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:50430603-50430241 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 197

Conread position: 23-380
Cow position: chr8:50800283-50799920 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:51019619-51019256 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:53120598-53120235 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-380
Cow position: chr8:54015355-54015718 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 23-380
Cow position: chr8:55270988-55270626 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 23-391
Cow position: chr8:46961559-46961934 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 198

Conread position: 27-372
Cow position: chr8:8524360-8524712 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 224

Conread position: 27-379
Cow position: chr8:22568751-22568393 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 223

Conread position: 27-380
Cow position: chr8:13831392-13831034 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 194

Conread position: 27-380
Cow position: chr8:50761937-50762296 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 27-384
Cow position: chr8:8532020-8531666 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 30-380
Cow position: chr8:47463082-47463437 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 220

Conread position: 31-273
Cow position: chr8:21252787-21253034 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 80

Conread position: 31-380
Cow position: chr8:1583022-1583374 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 33-380
Cow position: chr8:12247665-12247312 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 33-380
Cow position: chr8:46625297-46625650 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 217

Conread position: 34-378
Cow position: chr8:6852741-6853091 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 216

Conread position: 35-380
Cow position: chr8:1811322-1810971 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 215

Conread position: 41-380
Cow position: chr8:8667267-8666923 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 47-384
Cow position: chr8:30440920-30440588 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 171, 50

Conread position: 54-380
Cow position: chr8:18296701-18296369 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 167

Conread position: 54-380
Cow position: chr8:49822905-49822573 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 54-380
Cow position: chr8:60800898-60800566 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 56-334
Cow position: chr8:12306420-12306136 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 165

Conread position: 58-379
Cow position: chr8:16302648-16302977 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 58-380
Cow position: chr8:26591254-26590926 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 63-380
Cow position: chr8:34253118-34253441 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 187

Conread position: 63-380
Cow position: chr8:38401940-38402263 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 158

Conread position: 68-380
Cow position: chr8:47219078-47219396 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 153

Conread position: 89-319
Cow position: chr8:26177148-26176914 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 158

Conread position: 89-380
Cow position: chr8:14258683-14258978 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 159

Conread position: 89-380
Cow position: chr8:50817464-50817758 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 118, 159

Conread position: 92-380
Cow position: chr8:55444838-55444547 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 155

Conread position: 99-388
Cow position: chr8:44501291-44500999 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 108, 119

Conread position: 105-384
Cow position: chr8:48757083-48756804 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 8, 116

Conread position: 115-380
Cow position: chr8:1013768-1013500 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 103

Conread position: 115-380
Cow position: chr8:26868976-26868708 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 103

Conread position: 115-380
Cow position: chr8:51885602-51885338 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 0

Conread position: 142-322
Cow position: chr8:19988518-19988337 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 105

Conread position: 142-377
Cow position: chr8:43247639-43247877 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 105

Conread position: 142-380
Cow position: chr8:8311847-8311606 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 105

Conread position: 155-380
Cow position: chr8:7094576-7094348 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 63

Conread position: 230-384
Cow position: chr8:47128149-47128303 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.