Cow genome map
| Conread name: | rspc010_b16.y1 |
| Conread position: | 8-186 |
| Cow position: | chr12:10456129-10456310 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 9-160 |
| Cow position: | chr12:10834138-10833991 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 9-176 |
| Cow position: | chr12:37718778-37718610 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 9-176 |
| Cow position: | chr12:37742291-37742459 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 9-181 |
| Cow position: | chr12:14360636-14360807 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 22-164 |
| Cow position: | chr12:23916850-23916984 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 23-188 |
| Cow position: | chr12:25299367-25299531 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 148, 64 |
| Conread position: | 26-181 |
| Cow position: | chr12:40910275-40910122 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 29-184 |
| Cow position: | chr12:35136930-35137087 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 65 |
| Conread position: | 31-164 |
| Cow position: | chr12:6206346-6206479 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 33-153 |
| Cow position: | chr12:11106562-11106444 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 33-181 |
| Cow position: | chr12:19697419-19697557 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 33-181 |
| Cow position: | chr12:38126505-38126358 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 33-184 |
| Cow position: | chr12:13988388-13988540 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 33-184 |
| Cow position: | chr12:22323255-22323101 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 34-181 |
| Cow position: | chr12:24397145-24397002 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 137, 59 |
| Conread position: | 35-175 |
| Cow position: | chr12:29675122-29674983 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 36-150 |
| Cow position: | chr12:15050602-15050491 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 36-160 |
| Cow position: | chr12:10895532-10895409 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-163 |
| Cow position: | chr12:25814174-25814301 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 36-164 |
| Cow position: | chr12:10942308-10942439 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 36-170 |
| Cow position: | chr12:6188093-6187958 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 36-175 |
| Cow position: | chr12:5635432-5635295 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 134, 56 |
| Conread position: | 36-176 |
| Cow position: | chr12:3057108-3057247 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 36-176 |
| Cow position: | chr12:9482284-9482144 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 36-176 |
| Cow position: | chr12:13995777-13995636 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 36-176 |
| Cow position: | chr12:15495920-15496055 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 36-176 |
| Cow position: | chr12:22047942-22048082 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 134, 56 |
| Conread position: | 36-176 |
| Cow position: | chr12:37945927-37945788 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-181 |
| Cow position: | chr12:12699620-12699475 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 36-181 |
| Cow position: | chr12:26868793-26868653 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-181 |
| Cow position: | chr12:27663972-27663828 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-181 |
| Cow position: | chr12:35469426-35469288 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 40 |
| Conread position: | 36-184 |
| Cow position: | chr12:11587795-11587935 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 135, 51 |
| Conread position: | 36-184 |
| Cow position: | chr12:30042746-30042894 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 134, 56 |
| Conread position: | 36-184 |
| Cow position: | chr12:31602801-31602656 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-184 |
| Cow position: | chr12:33976220-33976369 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 36-184 |
| Cow position: | chr12:35368663-35368810 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 36-184 |
| Cow position: | chr12:37123671-37123818 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 36-184 |
| Cow position: | chr12:39150031-39149883 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 134, 56 |
| Conread position: | 36-184 |
| Cow position: | chr12:42967016-42967161 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 36-184 |
| Cow position: | chr12:43974310-43974458 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 36-185 |
| Cow position: | chr12:39738278-39738130 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 36-185 |
| Cow position: | chr12:40158004-40157861 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-186 |
| Cow position: | chr12:26749931-26749781 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-195 |
| Cow position: | chr12:21780183-21780338 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 36-198 |
| Cow position: | chr12:44892228-44892390 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 36-213 |
| Cow position: | chr12:4719968-4720138 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 37-184 |
| Cow position: | chr12:9055397-9055250 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 42-155 |
| Cow position: | chr12:16386430-16386319 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-164 |
| Cow position: | chr12:35241078-35240958 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 42-169 |
| Cow position: | chr12:41317086-41316960 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 42-170 |
| Cow position: | chr12:15389098-15389221 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 42-181 |
| Cow position: | chr12:4109070-4109209 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-184 |
| Cow position: | chr12:14223008-14223149 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 129, 60 |
| Conread position: | 42-185 |
| Cow position: | chr12:3454721-3454864 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 42-185 |
| Cow position: | chr12:39320415-39320557 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 129, 41 |
| Conread position: | 42-186 |
| Cow position: | chr12:31269181-31269325 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 42-186 |
| Cow position: | chr12:45782253-45782388 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 42-195 |
| Cow position: | chr12:35310659-35310505 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 42-195 |
| Cow position: | chr12:38155044-38154891 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 42-206 |
| Cow position: | chr12:4093745-4093582 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-234 |
| Cow position: | chr12:26670090-26670284 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 43-181 |
| Cow position: | chr12:43619308-43619446 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 43-184 |
| Cow position: | chr12:22752653-22752798 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 43-184 |
| Cow position: | chr12:24532597-24532456 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 129, 43 |
| Conread position: | 44-181 |
| Cow position: | chr12:37420477-37420340 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 46-164 |
| Cow position: | chr12:23939249-23939364 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 47-176 |
| Cow position: | chr12:6719419-6719548 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 49-185 |
| Cow position: | chr12:27385518-27385651 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 52-185 |
| Cow position: | chr12:35685135-35685004 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 54-181 |
| Cow position: | chr12:25193077-25193204 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 58-189 |
| Cow position: | chr12:29966145-29966276 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 94-229 |
| Cow position: | chr12:7514950-7515085 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 115 |
Show alignments to all cow chromosomes.