Cow genome map

Conread name: rspc010_b16.y1

Conread position: 6-181
Cow position: chr15:36540004-36539834 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 21

Conread position: 9-187
Cow position: chr15:41049406-41049575 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 161, 34

Conread position: 9-198
Cow position: chr15:12034624-12034824 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 9-204
Cow position: chr15:16667438-16667632 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 14

Conread position: 15-149
Cow position: chr15:19742509-19742375 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 6

Conread position: 15-169
Cow position: chr15:45369-45525 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 75

Conread position: 15-176
Cow position: chr15:51831738-51831899 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 157, 77

Conread position: 18-176
Cow position: chr15:42142925-42142766 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 27-184
Cow position: chr15:18762996-18763155 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 29-181
Cow position: chr15:30956286-30956436 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 56

Conread position: 31-184
Cow position: chr15:30001730-30001581 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 57

Conread position: 33-164
Cow position: chr15:7956044-7956173 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 124, 10

Conread position: 33-181
Cow position: chr15:17084241-17084094 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 10

Conread position: 33-184
Cow position: chr15:4500735-4500583 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 10

Conread position: 33-184
Cow position: chr15:18942062-18941919 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 10

Conread position: 33-189
Cow position: chr15:28924723-28924882 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 10

Conread position: 33-217
Cow position: chr15:40562650-40562828 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 35-182
Cow position: chr15:41348405-41348259 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 57

Conread position: 35-195
Cow position: chr15:39405775-39405616 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 136, 49

Conread position: 36-154
Cow position: chr15:32300407-32300290 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 36-154
Cow position: chr15:52432373-52432254 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 36-160
Cow position: chr15:20906002-20906119 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-164
Cow position: chr15:9465707-9465580 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr15:14760607-14760734 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr15:38652571-38652697 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 36-164
Cow position: chr15:38837779-38837650 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-164
Cow position: chr15:39619172-39619048 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 36-169
Cow position: chr15:4138166-4138035 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 36-169
Cow position: chr15:16415327-16415197 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 36-172
Cow position: chr15:38386619-38386484 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 36-176
Cow position: chr15:608176-608036 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 57

Conread position: 36-176
Cow position: chr15:4284404-4284264 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr15:8665570-8665714 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 36-176
Cow position: chr15:15177346-15177210 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 138, 35

Conread position: 36-176
Cow position: chr15:17124438-17124578 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 49

Conread position: 36-176
Cow position: chr15:17233223-17233079 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 87

Conread position: 36-176
Cow position: chr15:19553894-19554033 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr15:36435235-36435095 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr15:43020599-43020747 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-176
Cow position: chr15:44089133-44089272 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 32

Conread position: 36-176
Cow position: chr15:44119437-44119576 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-178
Cow position: chr15:85215-85354 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 36-181
Cow position: chr15:4295793-4295648 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 130

Conread position: 36-181
Cow position: chr15:4919036-4919182 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 56

Conread position: 36-181
Cow position: chr15:20459278-20459423 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position: chr15:22938732-22938879 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 50

Conread position: 36-181
Cow position: chr15:39473902-39474047 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 50

Conread position: 36-181
Cow position: chr15:41624864-41625008 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 36-181
Cow position: chr15:43114690-43114830 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 66

Conread position: 36-181
Cow position: chr15:43673914-43674058 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 57

Conread position: 36-184
Cow position: chr15:21821894-21822042 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position: chr15:22443954-22444102 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position: chr15:27900480-27900620 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 134, 51

Conread position: 36-185
Cow position: chr15:2931537-2931687 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 69

Conread position: 36-185
Cow position: chr15:15680811-15680960 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 135, 50

Conread position: 36-185
Cow position: chr15:26380714-26380863 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 50

Conread position: 36-185
Cow position: chr15:43626499-43626348 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 36-187
Cow position: chr15:20856446-20856598 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 57

Conread position: 36-189
Cow position: chr15:12913468-12913620 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 56

Conread position: 36-189
Cow position: chr15:32022287-32022436 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 36-192
Cow position: chr15:17621288-17621440 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 36-195
Cow position: chr15:27280669-27280512 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 44

Conread position: 36-195
Cow position: chr15:35642044-35641886 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 12

Conread position: 36-195
Cow position: chr15:36391704-36391545 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-222
Cow position: chr15:38228167-38227982 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 35

Conread position: 36-273
Cow position: chr15:20534420-20534666 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 135, 56

Conread position: 37-169
Cow position: chr15:23572657-23572788 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 37-183
Cow position: chr15:33729920-33729771 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 42-163
Cow position: chr15:4333887-4334004 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 42-163
Cow position: chr15:7750888-7751007 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 42-164
Cow position: chr15:17196172-17196051 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 42-164
Cow position: chr15:32324181-32324302 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 42-168
Cow position: chr15:16644762-16644886 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 42-169
Cow position: chr15:2968361-2968235 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 42-169
Cow position: chr15:16657497-16657371 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 42-169
Cow position: chr15:25366037-25366164 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-176
Cow position: chr15:8715158-8715289 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 50

Conread position: 42-181
Cow position: chr15:19771160-19771025 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 50

Conread position: 42-184
Cow position: chr15:21941821-21941963 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 51

Conread position: 42-186
Cow position: chr15:25667198-25667342 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 44

Conread position: 42-214
Cow position: chr15:26617963-26617787 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 42-249
Cow position: chr15:22242428-22242223 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 44

Conread position: 42-295
Cow position: chr15:17762933-17762685 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 64

Conread position: 43-163
Cow position: chr15:50552508-50552627 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 43-176
Cow position: chr15:12045514-12045648 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 44

Conread position: 43-187
Cow position: chr15:43590238-43590094 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 127, 49

Conread position: 44-164
Cow position: chr15:50953640-50953759 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 44-169
Cow position: chr15:48095383-48095257 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 48

Conread position: 44-170
Cow position: chr15:37719568-37719688 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 44-176
Cow position: chr15:20566153-20566021 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 42

Conread position: 44-178
Cow position: chr15:38935432-38935295 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 44-185
Cow position: chr15:6332442-6332578 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 127, 43

Conread position: 44-195
Cow position: chr15:7478974-7479124 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 45-191
Cow position: chr15:39286388-39286535 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 17

Conread position: 46-164
Cow position: chr15:4357068-4356954 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 46-164
Cow position: chr15:36457599-36457711 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 46-184
Cow position: chr15:52791962-52791825 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 125, 16

Conread position: 52-181
Cow position: chr15:32948734-32948598 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 40

Conread position: 54-184
Cow position: chr15:36904318-36904187 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 38

Conread position: 58-181
Cow position: chr15:16112408-16112282 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 58-187
Cow position: chr15:20649576-20649450 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.