Cow genome map

Conread name: rspc010_b16.y1

Conread position: 9-184
Cow position: chr17:18673967-18673792 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 28, 14

Conread position: 15-170
Cow position: chr17:10037483-10037640 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 74

Conread position: 15-206
Cow position: chr17:22773051-22772854 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 74

Conread position: 18-181
Cow position: chr17:35935243-35935402 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 12

Conread position: 29-195
Cow position: chr17:952245-952409 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 32-160
Cow position: chr17:17266038-17265910 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 55

Conread position: 32-163
Cow position: chr17:25095576-25095709 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 57

Conread position: 32-192
Cow position: chr17:34079016-34078855 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 61

Conread position: 33-176
Cow position: chr17:24559388-24559530 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 138, 10

Conread position: 33-185
Cow position: chr17:36468093-36467942 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 11

Conread position: 35-181
Cow position: chr17:19471672-19471531 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 137, 61

Conread position: 35-184
Cow position: chr17:40384113-40383966 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 133

Conread position: 36-151
Cow position: chr17:25467082-25467196 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 36-156
Cow position: chr17:5048030-5048149 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 36-159
Cow position: chr17:5011938-5012060 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 36-160
Cow position: chr17:14025810-14025687 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 36-163
Cow position: chr17:5038951-5038832 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 36-164
Cow position: chr17:1035497-1035370 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-164
Cow position: chr17:5012976-5012844 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 57

Conread position: 36-164
Cow position: chr17:6004898-6005024 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr17:9965927-9965798 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 40

Conread position: 36-164
Cow position: chr17:17180143-17180269 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-164
Cow position: chr17:21363481-21363607 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 51

Conread position: 36-164
Cow position: chr17:39963977-39964102 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 36-169
Cow position: chr17:10630883-10630752 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-169
Cow position: chr17:11269675-11269545 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 36-169
Cow position: chr17:15883771-15883904 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 36-169
Cow position: chr17:21806352-21806220 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 36-174
Cow position: chr17:31754676-31754537 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 56

Conread position: 36-176
Cow position: chr17:4817627-4817767 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position: chr17:6787036-6787177 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 57

Conread position: 36-176
Cow position: chr17:7803075-7802935 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 59

Conread position: 36-176
Cow position: chr17:10222110-10221970 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr17:11921065-11920925 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr17:14668602-14668742 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 62

Conread position: 36-176
Cow position: chr17:17222440-17222580 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chr17:20359212-20359350 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 0

Conread position: 36-176
Cow position: chr17:20929341-20929481 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 57

Conread position: 36-176
Cow position: chr17:26231054-26231202 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 36-176
Cow position: chr17:27795754-27795892 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 135, 20

Conread position: 36-176
Cow position: chr17:28795883-28795743 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 133, 50

Conread position: 36-176
Cow position: chr17:32027352-32027210 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 36-176
Cow position: chr17:32978833-32978700 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 136, 50

Conread position: 36-176
Cow position: chr17:36814461-36814602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 36-176
Cow position: chr17:43957760-43957898 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 135, 51

Conread position: 36-177
Cow position: chr17:7571203-7571344 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 57

Conread position: 36-181
Cow position: chr17:11618684-11618829 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 56

Conread position: 36-181
Cow position: chr17:24947433-24947575 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 36-181
Cow position: chr17:25342641-25342498 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 50

Conread position: 36-181
Cow position: chr17:26183444-26183588 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 36-184
Cow position: chr17:3387817-3387964 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 135, 36

Conread position: 36-184
Cow position: chr17:7659504-7659352 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 122

Conread position: 36-184
Cow position: chr17:20157707-20157852 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 135, 57

Conread position: 36-184
Cow position: chr17:20992942-20992793 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 36-184
Cow position: chr17:21181551-21181699 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 56

Conread position: 36-184
Cow position: chr17:21236622-21236770 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position: chr17:25584341-25584489 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position: chr17:26000217-26000364 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 135, 55

Conread position: 36-184
Cow position: chr17:40673470-40673618 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 56

Conread position: 36-185
Cow position: chr17:18201857-18202006 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 135, 143

Conread position: 36-185
Cow position: chr17:22128022-22128168 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 36-186
Cow position: chr17:26225127-26225275 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 135, 56

Conread position: 36-187
Cow position: chr17:1463231-1463080 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 51

Conread position: 36-187
Cow position: chr17:9770603-9770753 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 135, 35

Conread position: 36-187
Cow position: chr17:20306423-20306581 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 36-189
Cow position: chr17:25875495-25875645 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 55

Conread position: 36-189
Cow position: chr17:31736406-31736252 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 47

Conread position: 36-195
Cow position: chr17:20884623-20884781 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 51

Conread position: 36-197
Cow position: chr17:30156321-30156166 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 36-200
Cow position: chr17:6767161-6766995 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 56

Conread position: 36-206
Cow position: chr17:40741752-40741922 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 31

Conread position: 36-253
Cow position: chr17:29026172-29026403 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 134, 58

Conread position: 37-189
Cow position: chr17:40355359-40355510 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 37-192
Cow position: chr17:7864925-7865078 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 134, 55

Conread position: 42-160
Cow position: chr17:32143192-32143309 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 42-163
Cow position: chr17:15355037-15355157 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 42-169
Cow position: chr17:1081310-1081437 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 45

Conread position: 42-169
Cow position: chr17:10414604-10414722 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 42-169
Cow position: chr17:11397771-11397896 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 42-176
Cow position: chr17:32220778-32220645 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 38

Conread position: 42-176
Cow position: chr17:35149424-35149291 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 42-181
Cow position: chr17:5762048-5761907 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 42-181
Cow position: chr17:9509890-9509752 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 50

Conread position: 42-182
Cow position: chr17:2810738-2810875 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 42-185
Cow position: chr17:20913215-20913353 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 53

Conread position: 42-186
Cow position: chr17:12249130-12248986 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 50

Conread position: 42-187
Cow position: chr17:32278801-32278656 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 51

Conread position: 42-187
Cow position: chr17:32280771-32280916 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 51

Conread position: 42-189
Cow position: chr17:24841801-24841945 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 42-195
Cow position: chr17:26072655-26072502 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 53

Conread position: 42-219
Cow position: chr17:21973024-21972847 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 50

Conread position: 43-159
Cow position: chr17:28528960-28529075 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 43-184
Cow position: chr17:43323438-43323298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 128, 43

Conread position: 44-163
Cow position: chr17:27292349-27292231 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 44-164
Cow position: chr17:5350016-5349899 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 44-208
Cow position: chr17:25709820-25709984 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 42

Conread position: 46-192
Cow position: chr17:11056055-11055914 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 40

Conread position: 53-184
Cow position: chr17:4271246-4271114 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 55-175
Cow position: chr17:24826967-24826847 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 38

Conread position: 56-176
Cow position: chr17:3517598-3517479 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 36

Conread position: 58-178
Cow position: chr17:25815714-25815834 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 34

Show alignments to all cow chromosomes.