Cow genome map

Conread name: rspc010_b16.y1

Conread position: 6-176
Cow position: chr19:1791678-1791509 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 165, 11

Conread position: 9-176
Cow position: chr19:10755321-10755486 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 86

Conread position: 9-184
Cow position: chr19:23831363-23831541 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 173

Conread position: 10-160
Cow position: chr19:18013488-18013336 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 85

Conread position: 10-164
Cow position: chr19:28924778-28924932 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 77

Conread position: 17-164
Cow position: chr19:54105482-54105628 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 6

Conread position: 26-185
Cow position: chr19:25582342-25582495 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 61

Conread position: 32-181
Cow position: chr19:11211235-11211085 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 61

Conread position: 33-164
Cow position: chr19:8603381-8603513 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 80, 10

Conread position: 33-172
Cow position: chr19:33609935-33610070 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 33-184
Cow position: chr19:55385839-55385989 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 137, 10

Conread position: 34-164
Cow position: chr19:42776477-42776606 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 36-158
Cow position: chr19:30227568-30227689 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 36-158
Cow position: chr19:55247679-55247795 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 36-160
Cow position: chr19:24453463-24453340 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 36-163
Cow position: chr19:21817011-21817137 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr19:18984200-18984327 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 36-164
Cow position: chr19:42868063-42868190 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 36-169
Cow position: chr19:7794701-7794827 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 36-169
Cow position: chr19:35870837-35870964 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 24

Conread position: 36-169
Cow position: chr19:51637088-51637222 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 36-176
Cow position: chr19:2221027-2220887 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position: chr19:24068236-24068096 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position: chr19:25041199-25041060 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position: chr19:42217268-42217127 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 82

Conread position: 36-176
Cow position: chr19:43431279-43431137 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 44

Conread position: 36-176
Cow position: chr19:51621132-51620992 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 50

Conread position: 36-179
Cow position: chr19:8185251-8185393 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position: chr19:14253680-14253825 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position: chr19:35073005-35072861 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 135, 56

Conread position: 36-183
Cow position: chr19:23416835-23416689 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 36-184
Cow position: chr19:7595104-7594963 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 58

Conread position: 36-184
Cow position: chr19:8864789-8864936 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 33

Conread position: 36-184
Cow position: chr19:10574221-10574073 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 57

Conread position: 36-184
Cow position: chr19:23304442-23304296 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 134, 58

Conread position: 36-184
Cow position: chr19:34166415-34166561 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 51

Conread position: 36-184
Cow position: chr19:39795238-39795382 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 60

Conread position: 36-184
Cow position: chr19:43292381-43292526 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 135, 38

Conread position: 36-185
Cow position: chr19:6745422-6745575 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 145

Conread position: 36-187
Cow position: chr19:4586499-4586354 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 66

Conread position: 36-187
Cow position: chr19:39672955-39672807 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 36-189
Cow position: chr19:12761055-12760902 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 56

Conread position: 36-189
Cow position: chr19:14588453-14588603 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-195
Cow position: chr19:12714148-12714305 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 135, 56

Conread position: 36-195
Cow position: chr19:15438150-15438308 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 50

Conread position: 36-195
Cow position: chr19:30007240-30007389 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 22

Conread position: 36-195
Cow position: chr19:52356300-52356455 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 56

Conread position: 36-196
Cow position: chr19:25382639-25382476 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 50

Conread position: 36-261
Cow position: chr19:26976019-26975796 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 57

Conread position: 37-164
Cow position: chr19:6687954-6687825 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 37-164
Cow position: chr19:41089571-41089444 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 37-184
Cow position: chr19:13121234-13121093 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 134, 50

Conread position: 37-184
Cow position: chr19:53371849-53371701 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 55

Conread position: 37-186
Cow position: chr19:51185779-51185928 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 50

Conread position: 41-178
Cow position: chr19:13439521-13439661 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 54

Conread position: 42-159
Cow position: chr19:29139256-29139372 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 42-164
Cow position: chr19:24220453-24220334 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 42-164
Cow position: chr19:35444453-35444332 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 42-165
Cow position: chr19:40650837-40650958 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 42-176
Cow position: chr19:4339587-4339445 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 42-176
Cow position: chr19:17354912-17355044 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 33

Conread position: 42-176
Cow position: chr19:18214149-18214018 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 44

Conread position: 42-176
Cow position: chr19:19738054-19738188 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 51

Conread position: 42-176
Cow position: chr19:20622708-20622842 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 51

Conread position: 42-179
Cow position: chr19:38111519-38111656 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 115, 44

Conread position: 42-181
Cow position: chr19:5912906-5912767 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 50

Conread position: 42-184
Cow position: chr19:15969725-15969867 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 56

Conread position: 42-184
Cow position: chr19:38410922-38411062 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 50

Conread position: 42-184
Cow position: chr19:41946774-41946914 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 129, 44

Conread position: 42-186
Cow position: chr19:7558599-7558741 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 18

Conread position: 42-187
Cow position: chr19:30385039-30384901 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 45

Conread position: 42-195
Cow position: chr19:51031527-51031377 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 129, 51

Conread position: 42-198
Cow position: chr19:30917890-30917735 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 50

Conread position: 43-164
Cow position: chr19:51294233-51294113 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 43-194
Cow position: chr19:43189979-43190132 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 44-163
Cow position: chr19:35245998-35246116 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 44-176
Cow position: chr19:21244159-21244034 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 44-184
Cow position: chr19:2137769-2137635 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 48

Conread position: 44-211
Cow position: chr19:729691-729526 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 127, 47

Conread position: 45-184
Cow position: chr19:16686927-16686789 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 47

Conread position: 45-186
Cow position: chr19:49958927-49959064 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 46-164
Cow position: chr19:38021497-38021614 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 46-164
Cow position: chr19:55590290-55590407 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 46-176
Cow position: chr19:12497061-12497191 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 40

Conread position: 47-163
Cow position: chr19:31652617-31652732 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 48-176
Cow position: chr19:19468444-19468571 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 38

Conread position: 52-164
Cow position: chr19:38637723-38637612 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 52-178
Cow position: chr19:36191313-36191439 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 40

Conread position: 52-184
Cow position: chr19:4328811-4328680 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 119, 35

Conread position: 195-352
Cow position: chr19:8033913-8034070 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 69

Show alignments to all cow chromosomes.