Cow genome map
| Conread name: | rspc010_b16.y1 |
| Conread position: | 8-185 |
| Cow position: | chr20:32636261-32636085 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 15-164 |
| Cow position: | chr20:42897895-42897746 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 19-169 |
| Cow position: | chr20:11135668-11135521 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 23-163 |
| Cow position: | chr20:30817606-30817746 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 30-195 |
| Cow position: | chr20:26055129-26054968 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 31-181 |
| Cow position: | chr20:20892580-20892432 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 32-189 |
| Cow position: | chr20:30639686-30639526 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 32-272 |
| Cow position: | chr20:20202316-20202550 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 5, 55 |
| Conread position: | 33-176 |
| Cow position: | chr20:5703571-5703711 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 35-169 |
| Cow position: | chr20:18500628-18500761 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 36-158 |
| Cow position: | chr20:36741565-36741684 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 36-163 |
| Cow position: | chr20:6473835-6473960 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 36-163 |
| Cow position: | chr20:34083817-34083946 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 36-163 |
| Cow position: | chr20:38847132-38847002 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-164 |
| Cow position: | chr20:17606865-17606738 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-164 |
| Cow position: | chr20:17733457-17733330 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 36-164 |
| Cow position: | chr20:20967423-20967545 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 36-164 |
| Cow position: | chr20:28594389-28594519 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 36-164 |
| Cow position: | chr20:38664193-38664319 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-171 |
| Cow position: | chr20:16291790-16291924 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-172 |
| Cow position: | chr20:21291762-21291901 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 36-176 |
| Cow position: | chr20:19201633-19201773 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-176 |
| Cow position: | chr20:24883262-24883121 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 36-176 |
| Cow position: | chr20:28249282-28249422 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-177 |
| Cow position: | chr20:11008272-11008413 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-177 |
| Cow position: | chr20:17544726-17544867 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 36-178 |
| Cow position: | chr20:14433319-14433179 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 36-178 |
| Cow position: | chr20:17251819-17251960 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-181 |
| Cow position: | chr20:4945152-4945006 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 36-181 |
| Cow position: | chr20:25953367-25953510 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 135, 37 |
| Conread position: | 36-181 |
| Cow position: | chr20:31845183-31845044 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 36-181 |
| Cow position: | chr20:34202737-34202886 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 36-184 |
| Cow position: | chr20:3141676-3141822 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 48 |
| Conread position: | 36-184 |
| Cow position: | chr20:34097851-34097701 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 36-184 |
| Cow position: | chr20:37357958-37358106 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 36-185 |
| Cow position: | chr20:21344569-21344718 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-185 |
| Cow position: | chr20:35310428-35310577 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 143 |
| Conread position: | 36-189 |
| Cow position: | chr20:36097622-36097775 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 139, 56 |
| Conread position: | 36-192 |
| Cow position: | chr20:8679561-8679405 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 36-193 |
| Cow position: | chr20:10200448-10200606 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-195 |
| Cow position: | chr20:13023400-13023244 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 36-195 |
| Cow position: | chr20:14460483-14460643 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-238 |
| Cow position: | chr20:29990346-29990148 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 147, 56 |
| Conread position: | 36-258 |
| Cow position: | chr20:39417801-39417584 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 173, 56 |
| Conread position: | 37-160 |
| Cow position: | chr20:5814669-5814791 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 37-176 |
| Cow position: | chr20:29754879-29755017 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 37-180 |
| Cow position: | chr20:17524375-17524518 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 37-184 |
| Cow position: | chr20:5365029-5365175 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 37-184 |
| Cow position: | chr20:14755737-14755596 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 134, 49 |
| Conread position: | 39-257 |
| Cow position: | chr20:5009835-5010054 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 42-163 |
| Cow position: | chr20:12126196-12126076 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 42-164 |
| Cow position: | chr20:354793-354672 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 42-164 |
| Cow position: | chr20:3035441-3035565 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-164 |
| Cow position: | chr20:5268735-5268614 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 42-164 |
| Cow position: | chr20:27323374-27323495 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 42-176 |
| Cow position: | chr20:20124926-20124792 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 42-181 |
| Cow position: | chr20:297900-297760 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 42-184 |
| Cow position: | chr20:6054401-6054260 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 45 |
| Conread position: | 42-184 |
| Cow position: | chr20:24711949-24712087 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-185 |
| Cow position: | chr20:37609728-37609871 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 42-186 |
| Cow position: | chr20:23879999-23879857 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 42-189 |
| Cow position: | chr20:25021535-25021683 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 42-194 |
| Cow position: | chr20:32067385-32067232 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 42-200 |
| Cow position: | chr20:17370145-17369983 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 42-213 |
| Cow position: | chr20:39016764-39016591 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-215 |
| Cow position: | chr20:40442359-40442185 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 43-197 |
| Cow position: | chr20:6248492-6248338 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 128, 49 |
| Conread position: | 43-200 |
| Cow position: | chr20:23590640-23590489 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 44-169 |
| Cow position: | chr20:20459700-20459823 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 44-181 |
| Cow position: | chr20:14739711-14739576 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 45-158 |
| Cow position: | chr20:22959237-22959125 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 46-181 |
| Cow position: | chr20:28935533-28935399 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 46-184 |
| Cow position: | chr20:19623132-19622999 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 48-181 |
| Cow position: | chr20:22851587-22851720 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 48-184 |
| Cow position: | chr20:14283034-14283170 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 53-185 |
| Cow position: | chr20:11909568-11909437 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 53-379 |
| Cow position: | chr20:9034100-9033759 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 60-209 |
| Cow position: | chr20:30821546-30821696 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 63-195 |
| Cow position: | chr20:33435031-33434901 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 156-281 |
| Cow position: | chr20:24491889-24491761 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 187-273 |
| Cow position: | chr20:1009261-1009174 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 75 |
Show alignments to all cow chromosomes.