Cow genome map
| Conread name: | rspc010_b16.y1 |
| Conread position: | 8-169 |
| Cow position: | chr23:10844588-10844750 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 26-151 |
| Cow position: | chr23:33244241-33244360 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 31-169 |
| Cow position: | chr23:38738371-38738506 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 32-158 |
| Cow position: | chr23:1798167-1798293 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 32-189 |
| Cow position: | chr23:10675908-10676066 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 33-183 |
| Cow position: | chr23:9726482-9726334 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 33-187 |
| Cow position: | chr23:4521825-4521671 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 35-176 |
| Cow position: | chr23:21539215-21539356 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 35-189 |
| Cow position: | chr23:7856820-7856974 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 136, 57 |
| Conread position: | 36-150 |
| Cow position: | chr23:1701233-1701346 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-160 |
| Cow position: | chr23:35718373-35718495 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 36-163 |
| Cow position: | chr23:22324227-22324107 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-164 |
| Cow position: | chr23:1426924-1426797 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-164 |
| Cow position: | chr23:4291416-4291543 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-164 |
| Cow position: | chr23:4972827-4972951 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-164 |
| Cow position: | chr23:13836781-13836909 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-169 |
| Cow position: | chr23:4343543-4343675 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-169 |
| Cow position: | chr23:16582848-16582716 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-169 |
| Cow position: | chr23:30867238-30867108 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 36-169 |
| Cow position: | chr23:34264690-34264561 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 36-171 |
| Cow position: | chr23:24779481-24779347 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-176 |
| Cow position: | chr23:3270360-3270498 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 137, 56 |
| Conread position: | 36-176 |
| Cow position: | chr23:3890513-3890373 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 36-176 |
| Cow position: | chr23:18611703-18611564 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-176 |
| Cow position: | chr23:35239412-35239550 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 36-181 |
| Cow position: | chr23:799607-799462 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-181 |
| Cow position: | chr23:36200466-36200603 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 36-181 |
| Cow position: | chr23:40737957-40737811 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 36-182 |
| Cow position: | chr23:38089-38235 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-184 |
| Cow position: | chr23:4465905-4465756 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 36-184 |
| Cow position: | chr23:26975403-26975260 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 36-184 |
| Cow position: | chr23:39813561-39813709 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 36-185 |
| Cow position: | chr23:29330369-29330518 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 36-186 |
| Cow position: | chr23:40778326-40778472 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 36-187 |
| Cow position: | chr23:1759308-1759457 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 36-187 |
| Cow position: | chr23:2187003-2186856 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-189 |
| Cow position: | chr23:28580525-28580370 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 36-195 |
| Cow position: | chr23:5436581-5436422 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 36-198 |
| Cow position: | chr23:9874716-9874880 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 36-275 |
| Cow position: | chr23:4336128-4336372 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 51 |
| Conread position: | 36-281 |
| Cow position: | chr23:187240-187492 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 134, 57 |
| Conread position: | 37-158 |
| Cow position: | chr23:39125365-39125245 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 37-181 |
| Cow position: | chr23:18739401-18739257 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 136, 55 |
| Conread position: | 37-182 |
| Cow position: | chr23:35656470-35656614 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 125, 77 |
| Conread position: | 37-184 |
| Cow position: | chr23:39056819-39056965 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 42-142 |
| Cow position: | chr23:306590-306689 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-159 |
| Cow position: | chr23:35527147-35527263 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 42-164 |
| Cow position: | chr23:18387523-18387401 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-169 |
| Cow position: | chr23:5436936-5436810 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 42-170 |
| Cow position: | chr23:37948754-37948881 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 42-176 |
| Cow position: | chr23:809573-809706 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 128, 60 |
| Conread position: | 42-176 |
| Cow position: | chr23:4003714-4003848 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-181 |
| Cow position: | chr23:9876931-9876795 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 129, 75 |
| Conread position: | 42-184 |
| Cow position: | chr23:1655962-1656101 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 42-184 |
| Cow position: | chr23:2471070-2471212 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 42-184 |
| Cow position: | chr23:4803026-4803170 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 45 |
| Conread position: | 42-184 |
| Cow position: | chr23:40494386-40494539 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-185 |
| Cow position: | chr23:3979694-3979547 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 42-195 |
| Cow position: | chr23:307523-307676 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 43-160 |
| Cow position: | chr23:3983122-3983007 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 44-177 |
| Cow position: | chr23:32126372-32126505 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 42 |
| Conread position: | 44-181 |
| Cow position: | chr23:27307815-27307952 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 44-184 |
| Cow position: | chr23:32621355-32621495 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 44-187 |
| Cow position: | chr23:20557775-20557631 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 42 |
| Conread position: | 46-187 |
| Cow position: | chr23:2110848-2110988 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 47-178 |
| Cow position: | chr23:11081328-11081459 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 47-195 |
| Cow position: | chr23:4416215-4416067 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 48-177 |
| Cow position: | chr23:29607145-29607274 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 48-181 |
| Cow position: | chr23:17792351-17792220 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 48-189 |
| Cow position: | chr23:30617405-30617264 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 48-195 |
| Cow position: | chr23:1647913-1648057 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 48-195 |
| Cow position: | chr23:3244846-3244697 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-154 |
| Cow position: | chr23:18978862-18978761 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-187 |
| Cow position: | chr23:40542194-40542060 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 52-197 |
| Cow position: | chr23:1188842-1188701 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 133, 34 |
| Conread position: | 156-371 |
| Cow position: | chr23:3214587-3214367 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 126 |
Show alignments to all cow chromosomes.