Cow genome map

Conread name: rspc010_b16.y1

Conread position: 6-185
Cow position: chr25:30319429-30319245 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 9-158
Cow position: chr25:22203667-22203522 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 10-178
Cow position: chr25:7185245-7185077 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 5

Conread position: 29-195
Cow position: chr25:22768268-22768428 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 32-176
Cow position: chr25:21547209-21547351 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 63

Conread position: 35-184
Cow position: chr25:22642320-22642475 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 57

Conread position: 36-150
Cow position: chr25:18568160-18568047 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 36-152
Cow position: chr25:10138374-10138491 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 36-155
Cow position: chr25:36535363-36535246 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 36-160
Cow position: chr25:7380782-7380661 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 36-164
Cow position: chr25:7622876-7623003 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr25:11956861-11956985 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr25:22119600-22119475 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 36-164
Cow position: chr25:23323547-23323678 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 36-174
Cow position: chr25:33100632-33100764 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 135, 56

Conread position: 36-175
Cow position: chr25:15423568-15423428 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 36-176
Cow position: chr25:14164252-14164392 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 50

Conread position: 36-176
Cow position: chr25:35052565-35052424 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 50

Conread position: 36-181
Cow position: chr25:5808002-5808146 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 135, 50

Conread position: 36-181
Cow position: chr25:5846752-5846608 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 51

Conread position: 36-181
Cow position: chr25:9640980-9640835 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 135, 47

Conread position: 36-181
Cow position: chr25:30816946-30817091 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 56

Conread position: 36-181
Cow position: chr25:33272690-33272837 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 52

Conread position: 36-182
Cow position: chr25:15999495-15999350 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 40

Conread position: 36-182
Cow position: chr25:17119799-17119942 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 36-184
Cow position: chr25:7311339-7311192 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 36-184
Cow position: chr25:8410977-8410831 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 135, 51

Conread position: 36-184
Cow position: chr25:17474456-17474311 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-184
Cow position: chr25:33311269-33311121 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 56

Conread position: 36-185
Cow position: chr25:19460130-19460279 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 36

Conread position: 36-186
Cow position: chr25:17919031-17919180 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 99

Conread position: 36-187
Cow position: chr25:18201872-18201724 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 135, 57

Conread position: 36-191
Cow position: chr25:9494762-9494918 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 36-194
Cow position: chr25:33555662-33555819 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 57

Conread position: 36-198
Cow position: chr25:17724166-17724005 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 51

Conread position: 37-181
Cow position: chr25:22154082-22154228 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 142

Conread position: 37-195
Cow position: chr25:26989255-26989413 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 55

Conread position: 39-176
Cow position: chr25:6812175-6812033 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 42-150
Cow position: chr25:432985-432878 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 42-150
Cow position: chr25:19849927-19850035 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-163
Cow position: chr25:12097896-12098017 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 44

Conread position: 42-164
Cow position: chr25:7726725-7726846 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 42-176
Cow position: chr25:1763150-1763278 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 44

Conread position: 42-176
Cow position: chr25:31514244-31514378 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 129, 50

Conread position: 42-182
Cow position: chr25:447840-447706 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 123, 45

Conread position: 42-183
Cow position: chr25:22373427-22373285 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 44

Conread position: 42-185
Cow position: chr25:16921734-16921590 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 51

Conread position: 43-165
Cow position: chr25:11855486-11855365 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 108
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 44-184
Cow position: chr25:7277261-7277123 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 46

Conread position: 44-221
Cow position: chr25:36369883-36370060 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 127, 48

Conread position: 44-221
Cow position: chr25:36375574-36375751 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 127, 48

Conread position: 45-181
Cow position: chr25:28940075-28939941 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 41

Conread position: 46-164
Cow position: chr25:17725102-17725216 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 46-184
Cow position: chr25:12092681-12092819 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 121

Conread position: 46-184
Cow position: chr25:37648848-37648984 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 46

Conread position: 52-200
Cow position: chr25:1838314-1838461 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 119, 39

Conread position: 53-164
Cow position: chr25:18551261-18551152 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 67-186
Cow position: chr25:7358582-7358463 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 25

Show alignments to all cow chromosomes.